Ferrimonas lipolytica: HER31_04040
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Entry
HER31_04040 CDS
T06529
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HER31_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fes03000
]
HER31_04040
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_04040
Enzymes [BR:
fes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HER31_04040
Transcription factors [BR:
fes03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HER31_04040
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HER31_04040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QIZ76134
UniProt:
A0A6H1UAR7
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All DBs
Position
853977..855395
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AA seq
472 aa
AA seq
DB search
MTTLTLSSQQCRQARLAKDPRFDGRFFTGVHSTKIYCRSVCPVHPPLEKNVSYFATPAEA
EQAGLRPCLRCRPELAPPGADWRKHQPRLSRAVTLLHSHDVTSVRELAQACYLSERQLRR
LFQQHLGVSPLQALQTHRLLQAKQLLTDSSLTITEVAYASGYQSVRRFNDAFVQHYRLAP
SRFRQQTDVSESSALVLRLPFRRPFDYQNLLGFFEARAIDGVEWVEDGRFHKRLSPSQNM
MVEMGEQQLLVTLTGVAPQHLPDYRLRLRRMWDLDADPLIIATDLNKQPSMAALVEAYPG
LRLAAYWDGWEALLRAILGQQVTIEAGRKLLSKLVAIHTDAGGFGLPSPQQLLSLDIAPL
GIPGSRKQTLYRVAAAAVDWDLHRWPDVERLSEPLLAVKGVGPWTVAYWRLRSGMDSDSL
PSGDVVLRKAAAQQGLANDAAELEVVAQLWRPWRSYATNLLWRSTVEGNDVL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgttaacgctctcctcccaacagtgtcggcaggcacgactcgccaaagatccc
cgtttcgacgggcgcttttttaccggtgttcacagcaccaaaatctattgccgcagtgtt
tgccctgtgcacccaccgcttgagaagaatgtcagttattttgctaccccagcagaagca
gagcaggctggcttgcgcccatgcttacgctgccgccctgagttggcaccgccaggggca
gattggcgcaagcatcaacctcgacttagccgcgcggtgacgttattgcacagccatgac
gttaccagcgtaagggagctagcccaagcctgctatttgagcgagcggcaactgcggcgg
ttgtttcagcaacatcttggtgtatcgcctttgcaggcactgcaaacccatagattattg
caagctaagcagctattgaccgactcaagtttaactattactgaagtggcgtacgccagt
ggctaccagagtgtgcgtcggtttaatgatgcttttgtgcaacactatcgcttggcacca
agccgttttcgtcagcagactgatgtcagtgagagcagtgcgctggtattgcgactgccg
tttcgccggccctttgattatcagaacctgcttggttttttcgaagctcgagcgattgat
ggggttgagtgggttgaggatggccgatttcataaacgccttagcccgtcacaaaacatg
atggttgagatgggggaacagcagttgctggtcaccctgactggagtcgctccccagcat
ttaccagattatcggctccgtctccggcggatgtgggatctggatgctgacccgctgatt
attgcaactgatttgaataagcagccgtcaatggcggcgttggtcgaggcctacccaggc
ttgcgtttagcggcatactgggatggttgggaagcgctactgcgagcgattcttgggcag
caagtcactatcgaagcagggcgtaagttgttatcgaaactggttgctatccacactgat
gcaggcggttttggcttaccgtcgccgcaacaattactgagtttggatatcgctccattg
ggaatacccggtagccgcaagcaaaccctttatcgagttgctgccgcggcagtcgattgg
gatctccatcgctggccagatgttgaacggctgagcgaaccattattagcggttaaggga
gtagggccgtggacagtagcttattggcgtttacgtagtgggatggactcggatagttta
cccagcggtgatgtggtgctgcgtaaagcagcggcacagcagggattggctaacgatgca
gctgagttagaagtcgtggctcagttatggcgcccttggcgaagttatgccactaattta
ttgtggcgcagtacagtagaaggtaatgatgttttatag
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integrated database retrieval system
