Ferrimonas lipolytica: HER31_04700
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Entry
HER31_04700 CDS
T06529
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03420
Nucleotide excision repair
fes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HER31_04700
03430 Mismatch repair
HER31_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_04700
Enzymes [BR:
fes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HER31_04700
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HER31_04700
MMR (mismatch excision repair)
Other MMR factors
HER31_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_11
AAA_30
MA3
Motif
Other DBs
NCBI-ProteinID:
QIZ76252
UniProt:
A0A6H1UEN1
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All DBs
Position
complement(989364..991124)
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AA seq
586 aa
AA seq
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MKLSVEQHAAVNCNGNAYVTACPGSGKTRALTARIAKGVKDLKHKNNKVLAVTFTNRAAD
EIKTRLEENYTIESGRVWAGTIHSFALEWIIKPYASYSATLNSGYSIADEFETRRIINKL
KADKGLRIFDDVNTSFNRQGMVENRSVRAKEVEQEYRQILSSRKKIDFDQSLYFAFQLME
ALPEIAQTLSNIFTHICVDEVQDTQDLQYAILSKIFNESHKKPSLFIVGDENQAIYGGIG
GKSLSLAELNAEFMGSNINLFTFSDNYRSTQRLVDYFSVFRGIQGGLSKATHRNEHGTIS
FFNQSVDKDRLAEAISELIQTELNSGTNENDICVIAPQWAPIRSMTKKLITLLPQVKFDA
PALSPFHGQQDNFWLIVSKLVLTESSGRLLSARVRWANELLNNLMESHHHTRDLTAKKLL
KVINSFHSNTVVGTEYLKECFEFMLDELDIDLAHDLLLKEQFDLFFEKATSNIENNNGQY
EDTVVALKSFFKESTGVVVNSCHGVKGEEYKTVIAFGLLKGFVPHWSDIINQPAQVGQNS
ESKMLYVIASRAKEKLFLFAEYGRRTQGGNPYETSAMLSAYNYPYD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagcgttgaacagcacgctgctgtaaactgcaacggaaatgcatacgttaca
gcgtgtccaggaagtggaaaaactagagctcttacagcacgaatagcaaaaggcgttaag
gatttaaaacataaaaacaataaagtacttgctgtaactttcacaaacagagctgccgat
gaaataaagacaagactagaagaaaattataccatcgaaagtggccgcgtttgggctggg
acgattcactcatttgcactcgagtggataatcaagccttatgcctcatattctgcaaca
cttaattctggttattcaattgcagatgaatttgaaacaagaagaattattaacaaatta
aaagctgataaaggtttaaggatttttgatgacgtaaatacaagctttaataggcaaggc
atggttgaaaaccgtagtgtccgagcaaaagaagtagagcaggaataccgtcagatacta
tcttcaagaaagaaaattgattttgaccagtcactctacttcgcatttcagttaatggaa
gcgctgccagaaattgcccaaacgttaagcaatatatttactcatatatgcgttgatgaa
gttcaagatacacaagatcttcaatatgcaattttatccaaaatatttaacgagtcacat
aaaaagccatctttgtttattgtaggcgacgagaatcaagcaatttatggaggcattggg
gggaaatccctttccttagcagaattaaacgcagaatttatgggtagcaatatcaacctc
tttacatttagcgacaattaccgctctacgcaaagactggttgactacttctctgttttt
agaggaattcaaggaggcttatcaaaagcaacgcatagaaatgaacatggaaccataagc
ttttttaatcaatcagtagacaaagaccgtttggccgaagctatatcagagttaattcaa
acagaactcaatagtggtacaaatgaaaatgatatatgtgttattgctcctcagtgggca
ccgataaggtcaatgacaaagaagctcataactttactaccgcaagtaaagtttgacgct
ccagccttgtcaccatttcacggccagcaagacaatttttggttaatagtttccaaattg
gtattgactgagtcatcaggaaggttactaagtgctcgtgttagatgggcaaatgaattg
ctaaataatctcatggaaagtcatcatcatacccgtgatttaaccgctaaaaagctgctt
aaagttattaactcttttcacagtaatactgttgtaggcacagaataccttaaagagtgc
tttgagtttatgttggacgaattagacatagatttagcgcacgatttgttgctcaaggaa
caatttgacctgttctttgaaaaagctacttcaaatatagaaaacaacaacggccaatat
gaagacacggtagttgcccttaagagcttttttaaggagtccactggagtagttgtaaac
tcttgtcatggggtaaagggggaagagtataagacagtgatagcattcggtttacttaaa
ggttttgtcccccattggagtgacataattaatcaacctgctcaagtaggacaaaattct
gagtccaaaatgctttatgtaatagcctcaagagcaaaagagaagctttttttatttgcg
gaatatgggcgcagaactcaaggtggaaacccttatgaaacctctgccatgttgagtgca
tacaactatccatatgattga
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