Ferrimonas lipolytica: HER31_05550
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Entry
HER31_05550 CDS
T06529
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_05550
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HER31_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA
AAA_22
SLFN-g3_helicase
AAA_30
AAA_16
DZR
DUF7577
ERCC3_RAD25_C
ATPase_2
FAD_binding_4
Zn_ribbon_DZR_6
Prot_inhib_II
Motif
Other DBs
NCBI-ProteinID:
QIZ76368
UniProt:
A0A6H1UC01
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All DBs
Position
complement(1151250..1152986)
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AA seq
578 aa
AA seq
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MAYTLRPYQQDAVDAVVKHFRKHRAPAVVVLPTGAGKSLVIAELARLAKGRVLVLTHVQE
LVAQNQEKFAAFGEYSTIYSAGLGQKDRSAKVVFASVQSLAQISDKITEAYSIVIIDECH
RISLTDDSQYQRLLARLGQLNPRLCVLGLTATPYRLDSGWIYQQHINGTVRSTEPKPFRD
CVFELPIGQLIKQGFLTPPTMVDGAVASWLLPNEEGELPQVNPELRGRATTLICQQIIEQ
AQQRQGVIIFAATVRHGEEVLTQLPTAQAALLTAKTSKAERAELIEQFKLKKLKYLVNVA
VLTTGFDAPHVDLIALMRRTDSAALFQQMVGRGLRLAEGKTDCLVLDYAGNGYSIYSPEV
GEPRPHSDTVAVEVPCPKCGHQNAFWGRKDEFDLVIEHFGRRCQGSHQYEGKTEQCDYRF
RYKECPDCLAENDIAARVCHSCNKQLVDPDKRLQEVLKLKDYKVIRCGGVQLSKSQGKDG
NARLKVTWFDEDGDELNRTFAFDAPAQKGHFYHQFMRQHLKNPGQPLRLNSIDEVIAQQQ
LLRHPDFVIARLEKKRFWKVIETLFDYSGRYRKADSAG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcctatacccttcgcccctatcagcaagacgccgttgatgccgttgttaagcacttt
cgaaaacatcgagcccccgcggtggtggtactgcccaccggtgcaggcaaaagcttagtg
atcgcggagctggcaaggctcgccaaaggcagagtattagtgctaacccatgtacaggag
ttggtggcgcaaaaccaagaaaagtttgccgcctttggcgaatacagcaccatctattca
gcaggacttggccaaaaagatcgcagcgctaaggtagtatttgcttcggtacaatcgttg
gctcaaatcagcgataaaataaccgaggcctactccattgttatcattgacgagtgtcac
cggataagcctcactgacgatagccaataccaacgattactggctagactcggtcaactt
aatccccgtttgtgtgtactgggattaaccgcaacaccctaccgactggacagcggctgg
atctatcaacaacacatcaacggtacagttcgcagtaccgaaccaaaaccatttcgagac
tgcgtgtttgaattgcctatcggtcaattgattaaacaagggttcctaactccgccaacc
atggttgatggtgccgttgccagctggctactgcctaatgaagagggagaactgccgcag
gtaaacccagagctgcgcggccgtgctaccacccttatttgtcaacaaatcatagaacag
gcacaacagcgccaaggggtaattatcttcgctgctacggtgcgacatggagaagaggtc
ctaacccagcttcccactgcgcaagcggcgctgcttactgctaaaaccagtaaggcagag
cgcgctgaattgattgaacagttcaaactgaagaagcttaagtacctagttaacgtcgct
gtactcaccaccggctttgatgcgcctcacgtcgatcttattgcgttgatgcgacgcacc
gactcagcggcgctatttcaacagatggtcggccgtggcttgcgcttagcggaaggtaag
actgactgcttggtgcttgattatgcaggcaacggctattcaatctattcgcctgaagtc
ggcgagcctcggcctcatagcgacaccgttgcggttgaagttccttgccctaaatgtggc
catcaaaatgcattttggggacgcaaggacgagttcgatttggtcattgaacacttcggc
cggcggtgccaaggctcgcaccagtatgaaggtaagacggagcaatgcgactatcgtttt
cgctataaagagtgtcccgattgcctcgctgaaaatgacattgccgcacgagtgtgccac
agctgtaacaagcaacttgttgacccagacaagcgtttacaagaggtgcttaaactcaaa
gactataaagtgattcgttgcggcggagtacaactgagtaagagccaaggcaaagatggc
aacgcgcgattaaaagtaacctggtttgacgaagacggcgatgaacttaatcgaacattt
gcctttgacgcgccagcacaaaaagggcatttttatcatcagttcatgcgacagcattta
aagaatcctggccaaccgttgcgattgaatagcatcgacgaagtaatcgcccaacaacaa
ctgttgcgccacccagactttgtcatcgctcgattggaaaaaaaacgattctggaaagtg
attgaaaccctatttgattattctggccgctatcgcaaggcagatagcgccggctag
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