Ferrimonas lipolytica: HER31_05965
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Entry
HER31_05965 CDS
T06529
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HER31_05965 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_05965 (ruvB)
Enzymes [BR:
fes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HER31_05965 (ruvB)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HER31_05965 (ruvB)
RecFOR pathway proteins
HER31_05965 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_14
AAA_3
AAA_16
nSTAND3
RNA_helicase
Rad17
AAA_18
AAA_17
NTPase_1
TIP49
Bac_DnaA
Sigma54_activ_2
AAA_28
AAA_24
ABC_tran
NB-ARC
TsaE
ATP-synt_ab
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QIZ76446
UniProt:
A0A6H1UDZ7
LinkDB
All DBs
Position
1259115..1260122
Genome browser
AA seq
335 aa
AA seq
DB search
MIEADRLVAAPVESREEEVIDRAMRPKMLVDYTGQAEAKGQLDIFIQAARNRGEALDHLL
IFGPPGLGKTTLANIVANEMGVNIKSTSGPVLEKAGDLAAMLTNLEENDVLFIDEIHRLS
PVVEEILYSAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRARFGIPL
RLEFYNVADLTTIVNRSAEVLNLEIDQSGAIEVARRSRGTPRIANRLLRRVRDFAEVKYD
GRVTAEVASGALQLLDVDKEGFDLLDRKLLTTIIERFNGGPVGLENLAAAIGEERETIED
VLEPFLIQQGFLQRTPRGRIVSDRTYLHFGLSKPD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatcgcctagtggcggcaccggttgaaagccgagaagaggaagtgatt
gatcgcgctatgcgtcccaagatgctggtggattacaccggccaggcggaagcgaaaggg
cagttggatatctttattcaagctgcacgcaatcgcggcgaagcgctcgaccacttgttg
atttttggcccgccgggtttaggtaaaaccaccttagccaacattgtcgccaatgagatg
ggggtgaacattaagtccacctccggtccggtgcttgaaaaagccggcgatctggcagcg
atgttaaccaaccttgaagaaaacgacgtactgttcatcgatgagatccatcgcctcagc
cccgttgttgaagagatcctttattcagcgatggaagattatcagctggatatcatgatt
ggtgaaggcccagcggcgcgctcaattaagctcgatctaccgccgttcacgttaattggt
gctaccactcgagcaggttcactaacatcaccattgcgtgctcgttttggtattccgctg
cgattggagttctataacgttgctgatctcaccaccatcgtcaaccgcagtgccgaggta
ttgaatctcgagattgatcaatcgggtgctattgaagttgcacgccgcagtcgaggtact
ccacgtattgccaaccgcttgttacgccgggtgcgcgactttgccgaagtaaaatacgat
ggccgggtgactgctgaggtagcgtcaggagcgctgcaactgttagatgtcgataaagag
ggctttgatctgctcgatcgcaagttgctcaccaccattatcgaacgctttaatggtggt
ccagttgggttagagaaccttgctgctgccattggtgaagagcgtgaaaccatcgaagat
gtgttggagccgttcttaattcaacaagggttcctgcaacgaaccccccgtggtcgtatc
gtatccgatcgaacctatctgcactttggtttgtcgaagccagattaa
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