Ferrimonas lipolytica: HER31_06880
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Entry
HER31_06880 CDS
T06529
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fes03032
]
HER31_06880 (gyrA)
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_06880 (gyrA)
Enzymes [BR:
fes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HER31_06880 (gyrA)
DNA replication proteins [BR:
fes03032
]
Prokaryotic type
DNA Topoisomerases
HER31_06880 (gyrA)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HER31_06880 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QIZ76615
UniProt:
A0A6H1UC18
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Position
complement(1462218..1464914)
Genome browser
AA seq
898 aa
AA seq
DB search
MTDLAKEITPINIEEEMRTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEVRMDKIAHQLLADLDKDTVDYVPNYDGTEHIPAVLPTRVPNLLVNGASGIAVGMAT
NIPPHNLTEVVDGCLTVIDNPDVSIDELIEVIPGPDFPTGGIINGRKGIFDAYRTGRGKI
YVRSVTEVETDKNGREAIIVNELPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIELKRNEVPEVVLNNLFSQTQMQTVFGINMVALTNGQPKIFNLKETLEAFVRHRREV
VTRRTVYELRKARDRAHILEGLAIALANIDPVIELIRNAATPAEARQALQDQGWDLGNVA
SMLEKAGDDAARPEWLEPHYGIRDGKYYLTEEQAKAILDLRLHKLTGMEHESILGEYREL
LLQIAELLHILASTERLMEVIREELEEVKANFGDERKTEISASSADINMEDLITQEDVVV
TLSHEGYVKYQPLSDYEAQRRGGKGKAATRMKDEDFIERLLVANTHDTILCFSSIGKVYW
MRVFQLPLASRTARGRPIVNLLPLGDDERITAILPVDEYDPNKFIIFATAKGTVKKTALS
AYSRPLSSGIRAINLNDEDELIGVDITEGDNDVMLFSDAGKVVRFNEIQRDSETGLPKLD
PETNEPLQALRAMGRTAAGVRGIALEGDQKVVSMIIPRGDGHILTVTENGYGKRTAESEY
PTKSRATKGVISIKVSERNGAVIGAVQVSEKDEIMMITNGGTLVRTRVSEVSEVGRNTQG
VILIRTGEEEQVVALQRIDEIDDVENELGEEGEVAEQTDAPTAEVPAADDADQSANEE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggccaaagaaatcacgccaattaacatcgaagaagagatgagaacctct
tacctcgattacgccatgagcgttattgttggacgtgctttgcctgatgtacgagacgga
ctgaaaccagtacaccgtcgcgtgctatttgcaatgaacgagttgggcaacgattggaac
aagccctacaaaaaatcagctcgtgtggttggtgatgtaattggtaaatatcacccacac
ggcgacagcgccgtttacgatacaatcgttcgtatggcgcagcctttctcgctacgctat
accttggttgatggccaaggtaacttcggttctgttgatggcgactccgccgcagcaatg
cgttacaccgaagtgcgtatggacaagatcgcgcaccagttgctggcggatctagacaag
gatactgtcgactatgtgccgaactatgatggcactgagcacattcctgcagtactacca
acaagagtaccgaaccttctggtaaacggtgcctctggtattgcggtaggtatggcaact
aacatccctccgcataacttgacggaagtggtagatggttgtttgaccgtaatcgataat
cctgatgttagcatcgatgaattgattgaagttatcccaggtccggatttcccgactggc
ggtatcatcaacggtcgtaaaggtatctttgatgcttaccgtactggtcgtggcaaaatc
tacgttcgttcggtaactgaagttgagaccgataagaatggtcgtgaagcgatcatcgtt
aatgaacttccttatcaggtaaacaaagcacgactaatcgaaaagattgccgagctggtt
aaagataagaagattgaaggcattagcggcttgcgtgatgagtccgataaagacggcatg
cgcatcgttatcgagttgaagcgtaacgaagtgccagaagtggtgctgaacaacctgttc
tctcaaactcagatgcaaactgtgtttggtatcaatatggttgcgttgactaacggtcaa
cctaagatttttaatcttaaggaaaccttagaagcgttcgtgcgtcaccgccgtgaagtt
gttacccgtcgtaccgtgtatgaactgcgtaaagctcgcgatcgtgcccatatccttgaa
ggcttagccattgcgcttgccaacatcgatccggttattgaactgatccgtaacgctgca
acaccagcagaagcgcgccaagccctacaagatcaaggttgggatttaggtaacgttgct
tcgatgcttgaaaaagcaggtgacgacgctgctcgcccagagtggttggaaccgcattac
ggtattcgcgatggtaaatattacctgaccgaagagcaggccaaagcgatcttggatctg
cgcttgcacaagctaaccggcatggaacacgaaagtatccttggcgaataccgcgaattg
ttgcttcagattgctgaattgctacacattttggctagcaccgaacgcttgatggaagtg
attcgtgaagagctggaggaggtgaaagccaacttcggtgatgaacgtaaaactgaaatc
agtgcctcgtcagccgacatcaacatggaagacttgatcactcaagaagatgttgtcgtc
acgttgtcgcatgaaggttacgttaagtaccagccgctgagcgattacgaagcacagcgt
cgcggtggtaaaggtaaagcagcaacccgaatgaaggatgaagacttcattgagaggctg
ctggttgctaatacccacgacaccattttgtgtttctctagtatcggtaaagtgtattgg
atgcgcgtattccagttgccattggcatcccgtactgcacgaggccggccaatcgttaac
ttgttgccgttaggtgatgatgaacgtattaccgctatcttgccggttgacgaatatgat
ccgaacaagttcatcattttcgctaccgccaaaggtacggtgaagaagacggctttgagc
gcatacagccgcccactgtcttccggtatccgtgcaattaacttgaacgacgaagatgaa
ctaattggcgttgatattactgaaggtgataacgacgtaatgctgttctctgacgccggt
aaggtcgtccgtttcaacgagattcagcgtgactctgaaactggtttgcctaagcttgat
ccagaaactaacgagccactgcaagcattgcgtgccatgggccgcactgcagcgggtgtt
cgtggtatcgcgttggaaggcgatcagaaagtagtatcgatgattatccctcgtggtgat
ggtcatattcttactgtgaccgaaaatggttacggcaagcgtactgctgaatcagaatac
ccaaccaagagccgtgcaaccaaaggggttatctccatcaaggtaagcgagcgaaatgga
gcggtaattggtgcagttcaggtcagcgagaaagatgaaatcatgatgatcaccaatggt
ggcactctggttcgaactcgcgtatctgaagtgtctgaggttggtcgtaacacccaaggt
gtgattcttatccgtaccggtgaggaagagcaggttgtggcgttgcaacgaattgatgag
atcgacgacgttgaaaacgagttaggcgaagagggtgaggttgcagagcaaaccgacgct
ccaactgcggaagtgccggcggcagatgatgctgaccaaagcgctaacgaagagtaa
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