Ferrimonas lipolytica: HER31_07575
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Entry
HER31_07575 CDS
T06529
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fes03016
]
HER31_07575 (rnd)
Enzymes [BR:
fes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HER31_07575 (rnd)
Transfer RNA biogenesis [BR:
fes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HER31_07575 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QIZ76743
UniProt:
A0A6H1UEH7
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All DBs
Position
complement(1619847..1620959)
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AA seq
370 aa
AA seq
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MMQWHWIDSDAGLAEVCDETRLGDYVAIDTEFVRTRTYYAQLGLIQLYNGTTLALIDPLA
IDDMSPFWELLSDESVIKVLHSGSEDLEIFAQRGGVVPKPLFDSQVAGVLLNLGPAMGYG
KLIQHYTDIELDKGESRTDWLARPLRQTQLEYAAADVFYLYQIFPQMHAAIEEMGRLDWV
WQEGERACRGRLDPEQPEKAYLKVKNGWQLRPNQLAVLKSLAAWRLEVAQRKDLALGFVV
KDAVLLNLAKHAPRSLAYLERLEGLDPRTLQRYGKSMLGAISRADLNNPPEPIDPTALDP
DYREAVAEVRVVMQNLAKEHQVQPEFLASKKLVSQYVSYVWRGCEGNLPEILIGWRGELS
SDTLSKLSLR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtggcattggattgatagtgatgccggtttggctgaggtatgtgatgagacc
cgtctaggtgactatgtcgcgatcgataccgagtttgtgcgtactcgtacctactacgct
caactaggtttgatccaactttataacggcaccacgctggcacttatcgacccgttagcg
attgatgatatgtcgccattctgggagctgcttagtgacgaatcggtaatcaaggtattg
cacagtggaagtgaggatcttgagatctttgctcagcgcggtggggtagtgcctaaaccg
ttgtttgattctcaggtagcgggagttttgcttaaccttggtccggcgatgggttatggc
aaattgattcagcattacaccgatattgagctggataaaggcgagtcccgcaccgattgg
ttagcgcgtccgttgcgacaaacccagcttgagtacgctgccgcagacgtgttttatctg
tatcaaatcttcccgcagatgcatgctgcgatcgaagagatgggtcgattggattgggtt
tggcaagaaggtgaacgtgcctgtcgtggccgactcgacccggaacagccagaaaaagcc
tacctcaaggtcaaaaacggatggcaacttcgaccaaaccagctggcggtattgaagtct
ttggcagcgtggcgtttggaagtggcgcagcgtaaagatcttgcacttggttttgtggtt
aaggatgcggtgttgctcaaccttgctaagcatgcacctcgttcattggcttatcttgag
cgtttggaaggcctagacccacgcacactgcaacgctacggcaagtcaatgcttggtgcc
atcagtcgtgctgacctaaacaatccgcctgagccaatcgatccgaccgcacttgatccg
gattatcgtgaggcggtagccgaagttagggtggttatgcagaacttggccaaggagcat
caggttcagcctgaatttttggcttctaagaagttggttagccaatacgtcagttatgta
tggcgtggttgcgagggtaacttgccagagatcttaatcggttggcgaggtgaattatct
tccgacaccttatcgaaactatcacttagatag
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