KEGG   Ferrimonas lipolytica: HER31_09830
Entry
HER31_09830       CDS       T06529                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fes  Ferrimonas lipolytica
Pathway
fes03030  DNA replication
fes03430  Mismatch repair
fes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HER31_09830
   03430 Mismatch repair
    HER31_09830
   03440 Homologous recombination
    HER31_09830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fes03032]
    HER31_09830
   03400 DNA repair and recombination proteins [BR:fes03400]
    HER31_09830
Enzymes [BR:fes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HER31_09830
DNA replication proteins [BR:fes03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HER31_09830
DNA repair and recombination proteins [BR:fes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HER31_09830
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QIZ77149
UniProt: A0A6H1UEU3
LinkDB
Position
complement(2127617..2128228)
AA seq 203 aa
MSLSHLAANTIVVLDFETTGLSPKQGDRAIEIGAVKLVDGQVVDRFSELMDPGFRVSGFI
ESYTGISNSMLAGAPACAEVMHRFADFIQGCNMLAHNASFDQKFLDAELAAISRDYQGSF
VCSLLIGRRIYPNAPNHKLGTLVEYKGVQHDGVFHRALADAEMTAKLWLAMLADCDTKMT
FKQMHTLSKTPKAKVPDYLSALT
NT seq 612 nt   +upstreamnt  +downstreamnt
atgtctttatctcatctcgccgctaataccattgttgtactcgattttgaaaccaccggt
ttatcaccaaaacagggtgatagggcgattgagattggtgcggttaagttggttgatggt
caggtggtggatcgcttcagtgaattgatggatccgggctttcgggtgagtggctttatt
gaaagctatactggcattagcaacagcatgttagctggcgcgccagcttgtgccgaggtg
atgcaccgttttgctgactttattcaaggctgcaatatgctggcgcacaacgcttcattt
gatcagaagttcttagatgccgagctcgctgcaattagccgtgattaccaaggtagcttt
gtttgctcgttgctgattggtcgcaggatctatcctaatgcacctaaccataaacttggc
accttagtggaatacaaaggtgttcagcacgatggtgtgtttcaccgagcgttagccgat
gcggaaatgacggctaagttgtggttggcgatgctggcagattgtgacactaaaatgaca
ttcaagcagatgcatacactgagcaaaacacctaaagccaaggttccagactacttatcg
gcattaacatag

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