Ferrimonas lipolytica: HER31_09865
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Entry
HER31_09865 CDS
T06529
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_09865 (sbcD)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HER31_09865 (sbcD)
Archaeal homologous recombinant proteins
HER31_09865 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF2498
FBPase_2
VPS51_Exo84_N
Motif
Other DBs
NCBI-ProteinID:
QIZ77155
UniProt:
A0A6H1UDJ2
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All DBs
Position
2132961..2134175
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AA seq
404 aa
AA seq
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MRLLHTSDWHLGQYFYGKSRAQEHNAFIDWLLSQIVDNKVDALIVAGDLFDTGTPPSYAR
AIYNRLVTAMSKLDCQLVLLGGNHDSVAVLNESKALLAELGTHLTANASDDIDSQLVELT
NSSGEAIGIVCAVPYLRPRDIQRSSADQSASDKQLQLQLQIAEHYQQLFAAAQQIKADRA
LPIIATGHLTTVGASSSDSVRDLYIGTLDAFPASAFPPADYVALGHIHRSQIIGGNNSIR
YSGSPIPLSFDELGSDKKVLLVDVDAEQPAVVTELVIPTFQPMALIKGDLADIEQQLQQF
TAAEQITWLDIEVQSESYLSDLQGRIETLCQELPVEALLVRRQRLLQRDNLSQQHNETLA
ELSVNDVFARRLAQEQFEGEHNQQRKQRIEQHFAATLAQLEQTQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttactgcacacctcagattggcacctaggccaatatttctacggcaagagccgt
gcgcaagaacacaacgccttcattgactggctgctcagccaaatcgtcgataataaggtt
gatgcgctcatcgttgccggcgacctatttgataccggcacaccaccaagttacgcccgc
gccatctacaatcgcttggttaccgctatgagtaagcttgactgtcagttggtgctgctt
ggcggcaaccatgactcggttgcggtgttaaacgagtctaaagccttactcgcagaatta
ggcacacaccttaccgccaatgccagcgacgacatcgatagtcaactggtcgaattaacc
aatagcagcggcgaagccattggcatcgtctgtgcggttccctatttgcgaccacgtgat
atccaacgctccagtgccgatcaaagcgccagcgataaacagttacaactacagctacaa
atagctgaacactaccaacaactttttgcagcagcgcagcagataaaagctgatcgggca
ttaccaattattgctactggccacttaaccaccgttggtgccagtagtagtgactcggtc
cgcgatctctatattggcaccttagatgcgtttccagccagcgcattcccaccagcggac
tacgtcgctcttggtcatattcatcgcagccagattattggtgggaataacagcatccgc
tatagcggcagccctatcccacttagctttgatgaacttggaagcgataaaaaagttctc
ttggtggacgtcgacgcagagcagcccgcggtggtgactgagctggttattccaaccttc
cagccgatggctcttatcaaaggcgacttggctgacattgagcaacagttgcagcaattt
accgcagctgagcagatcacctggctcgatattgaggtccagagcgaaagctacttatct
gacttacaagggcgtatcgaaaccctatgccaagagctgccggttgaggcactgctcgtg
cggcggcaacgattactgcagcgcgataacctgagccagcaacataatgaaaccttggca
gagttgagcgtaaatgatgtatttgcgcgtcgattggcgcaagaacagttcgaaggcgaa
cacaatcaacaacgtaaacagcgaatcgaacagcactttgccgctaccctagcgcagctg
gagcaaacacaatga
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