Ferrimonas lipolytica: HER31_10005
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Entry
HER31_10005 CDS
T06529
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fes03016
]
HER31_10005 (truA)
Enzymes [BR:
fes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HER31_10005 (truA)
Transfer RNA biogenesis [BR:
fes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HER31_10005 (truA)
Prokaryotic type
HER31_10005 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QIZ77179
UniProt:
A0A6H1UEX2
LinkDB
All DBs
Position
complement(2162596..2163390)
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AA seq
264 aa
AA seq
DB search
MRIALGIEYDGHGYFGWQKQREVIGVQQKLEEALAKVANHPVDVLCAGRTDAGVHGTGQV
VHFDAQFDRRPAAWTLGANANLPDNIAVRWAQPVSDDFHARFSATARRYRYVIYNHRLRP
GILRHGVSHYYHQLDEKRMELAGQALLGENDFTSFRAIQCQSHSPWRNVHHIHVDRFGEY
IVVDIKANAFVHHMVRNIVGSLLEVGMGNKPVEWIAELLAAKDRNIAGATAKAEGLYLVE
VDYPAEFNIPKSTPGPLFLPDSLR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgctttgggcattgaatacgatggacacggctacttcggttggcaaaaacaa
cgtgaagtgatcggggtgcagcagaagctggaagaggcattagccaaggtggctaaccat
cctgttgatgtgttgtgtgcaggtcgaacggatgcgggtgttcatggtacaggccaagtg
gttcactttgatgcacagtttgatcgtcgtccggctgcgtggactctaggcgccaacgcc
aacctaccagacaatatcgccgtgcgttgggcacagccagtaagtgatgacttccacgct
cgctttagcgctactgcccgacgttatcgctacgttatttacaatcaccgcctgcgcccg
ggaatcctccgtcatggagtaagtcattactatcatcaactggatgaaaaacggatggag
ttggccgggcaagcgttgttgggagagaacgatttcacctcatttcgcgcgatccagtgt
caatcccatagcccatggcgcaacgtgcatcatatccatgtagatcgcttcggtgagtac
atcgtggtggatattaaggccaatgcctttgttcatcatatggtgcgtaatatcgtaggc
tcattgctggaagtgggcatgggcaataagccggttgagtggattgctgaattgttggct
gccaaagaccggaacattgctggagcaaccgcgaaggcggaaggactgtacttggttgag
gtggattaccctgctgagttcaatattccgaaaagcacccccggtcctttattcctacca
gatagtttgcgttaa
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