Ferrimonas lipolytica: HER31_11520
Help
Entry
HER31_11520 CDS
T06529
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fes03009
]
HER31_11520 (srmB)
Enzymes [BR:
fes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HER31_11520 (srmB)
Ribosome biogenesis [BR:
fes03009
]
Prokaryotic type
rRNA helicases
HER31_11520 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Helicase_RecD
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QIZ77459
UniProt:
A0A6H1UFQ7
LinkDB
All DBs
Position
2525706..2526926
Genome browser
AA seq
406 aa
AA seq
DB search
MSFLELDLDPRLLSALAKAGYTKPTTIQTEVLECALEQRDILANAPTGTGKTAAFLLPAI
QHLLDFRRRDPGHARVLILTPTRELAEQVRQYGEKLVRGTELTIGAIVGGRDYQLDADLL
TANLDILVATPGRLEYYLESERFDPRQVELLIIDEADRMLDLGFMPVVEHIANEVRWRKQ
TMLFSATLEGSGLNQFVHKLLEDPVRCDAKPPRSERKKINQSYYRADDANHKYKLLKRLL
ADEECERSIIFVRTRERAVQLNSKLFASKVRIAVLQGDMAQGQRDRAIELFKEGKVKHLV
ATDVAARGLDIQDVTHVINYDLPRKGDIYLHRIGRTARAGAKGSAVSIVEAHDYPHLEKI
QRYVGEPIRYRVIESLRPLSKAPKFGKPKKTKAKAKTSASKKKKKK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttagaattagatcttgatccgcggttactcagtgcactggccaaggccggt
tacacaaaacctactaccattcagaccgaagtgctggaatgtgcgttagagcaacgtgac
attctcgccaacgccccaaccggtaccggcaaaaccgccgctttcctgttgcctgcaatc
cagcatctgcttgatttccgtcgccgcgacccaggtcatgcccgcgtactgattctcacc
cctactcgtgagttggctgagcaggtgcgtcagtatggtgaaaaactagtccgtggcacc
gagttgaccatcggcgctattgttggtggccgcgattaccagctggatgccgacctgctt
accgctaacctagatatcttggtagcaactccaggacgtcttgagtactaccttgagagc
gagcgctttgatccacgccaggtagaacttctgattatcgacgaagccgatcgcatgctc
gatttgggctttatgccagtggttgaacacattgctaatgaagtgcgctggcgtaagcaa
accatgctgttctctgccaccttggaaggctctggcctgaaccaatttgtgcataaactg
ctggaagatcctgtgcgttgcgacgccaagccgccacgcagtgagcgtaaaaagattaac
cagagctactaccgtgctgacgatgctaaccacaaatacaagcttctgaagcgtctgctg
gccgacgaagagtgtgagcgcagtatcatcttcgtccgcacccgtgagcgcgcagtacag
ctaaactcgaagttgttcgcctctaaggtacgcattgcagtattgcaaggcgacatggct
cagggacaacgagatcgtgccatcgagttgttcaaagagggcaaggtaaagcatctggtt
gccaccgatgtcgccgctcgtggcttggatatccaagacgtgacccacgtaatcaactac
gatttgccgcgtaagggcgacatatacttacaccgtatcggtcgtaccgctcgtgctggt
gccaagggcagcgccgtatctatcgtggaagcgcatgactacccacacttagagaagatc
cagcgttacgttggtgagcccattcgctaccgcgtaatcgaaagcctgcgtccgctgtct
aaggcaccgaaattcggcaagccgaaaaagaccaaagccaaggctaaaacctcagcttca
aagaagaaaaagaaaaaataa
DBGET
integrated database retrieval system
