Ferrimonas lipolytica: HER31_12120
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Entry
HER31_12120 CDS
T06529
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes00260
Glycine, serine and threonine metabolism
fes00460
Cyanoamino acid metabolism
fes00630
Glyoxylate and dicarboxylate metabolism
fes00670
One carbon pool by folate
fes00680
Methane metabolism
fes01100
Metabolic pathways
fes01110
Biosynthesis of secondary metabolites
fes01120
Microbial metabolism in diverse environments
fes01200
Carbon metabolism
fes01230
Biosynthesis of amino acids
fes01240
Biosynthesis of cofactors
fes04981
Folate transport and metabolism
Module
fes_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HER31_12120
09102 Energy metabolism
00680 Methane metabolism
HER31_12120
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HER31_12120
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HER31_12120
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HER31_12120
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HER31_12120
Enzymes [BR:
fes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HER31_12120
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QIZ77572
UniProt:
A0A6H1UIF3
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All DBs
Position
complement(2641179..2642435)
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AA seq
418 aa
AA seq
DB search
MLEKKMNIADFDPELWNAMEAERVRQEEHIELIASENYTSPRVLEAQGSQLTNKYAEGYP
NKRYYGGCEHVDVAEQLAIDRACELFGASYANVQPHSGSQANSAVFMALLNAGDTVLGMS
LAHGGHLTHGASVSFSGKIYNAVQYGITPESGEIDYAEVRAMAIEHKPKMIIAGFSAYSG
IVDWAKFREIADEVGAYLFVDMAHVAGLIAAGEYPNPLPHAHVVTTTTHKTLAGPRGGLI
LSAIDDETIYKKLNSAVFPGGQGGPLCHVIAAKAVAFKEALQPEFKIYQKQVVKNAQAMA
DVFINRGYKIVSGGTQNHLFLLDLIDKDITGKDADAALGRANITVNKNSVPNDPRSPFVT
SGLRIGTPALTRRGFAESEARELTGWICDILDNFGDETVVERVKSQVVELCKRYPVYA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaaaaagatgaacatcgccgatttcgatccggagttgtggaatgcgatggaa
gcagagcgagtgcgtcaggaagagcacattgaacttatcgcctctgaaaactacaccagc
ccgcgtgtacttgaagcgcaaggttcgcagctaaccaataaatacgctgaaggttaccca
aacaagcgttattacggcggttgtgagcacgtggatgtggctgagcaactggccatcgat
cgtgcctgtgaactgtttggtgctagctacgcgaacgtgcaaccacactcaggttcacaa
gctaactccgcggtatttatggcgctgttgaatgctggcgatactgttctaggcatgagt
ttggctcacggtggccacctaactcatggtgcttcggtatcgttctctggcaagatctac
aatgcggtgcagtacggtattacccctgaaagtggcgagatcgattacgccgaagtgcgc
gctatggcgatcgaacataagccgaagatgatcatcgccggtttctctgcatactctggc
atcgttgattgggctaaattccgtgagatcgctgatgaagttggcgcctatctgtttgta
gacatggctcatgtcgccggtttgattgccgcaggtgagtacccgaacccgctgccacac
gcgcatgtagttaccaccaccacccataaaaccttagcgggtccacgtggcggtttgatc
ttgtcagcaattgatgatgaaaccatctacaaaaagctgaactctgctgttttccctggc
ggtcaaggtggcccactgtgtcacgttatcgcagcgaaggctgtggccttcaaagaagcg
ttacagcctgagtttaagatctaccaaaaacaagtagtgaagaacgctcaagcgatggcc
gacgtgtttattaaccgtggttacaaaatcgtttctggcggtactcagaatcacctgttc
ttgttggatctgatcgacaaagatattaccggtaaagatgctgatgctgcccttggccgc
gccaacatcaccgtgaataaaaactcggtgccaaatgatccgcgcagcccgtttgtcacc
tcaggtttacgcattggcactccggcgttaacccgccgtggttttgctgagtcagaagcc
cgtgagctgaccggttggatctgtgacattctcgataactttggtgatgaaaccgtggtt
gagcgagttaaatctcaagtggttgagttgtgtaaacgttacccagtttacgcataa
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