Ferrimonas lipolytica: HER31_12180
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Entry
HER31_12180 CDS
T06529
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03030
DNA replication
fes03430
Mismatch repair
fes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HER31_12180 (holA)
03430 Mismatch repair
HER31_12180 (holA)
03440 Homologous recombination
HER31_12180 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fes03032
]
HER31_12180 (holA)
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_12180 (holA)
Enzymes [BR:
fes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HER31_12180 (holA)
DNA replication proteins [BR:
fes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HER31_12180 (holA)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HER31_12180 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QIZ77583
UniProt:
A0A6H1UGY5
LinkDB
All DBs
Position
2656112..2657167
Genome browser
AA seq
351 aa
AA seq
DB search
MRIFASQLQRELTKLPQVMMVFGDDVLIREECRDTIREQLMKRQGIEERLSMVQESSFDW
QGLLQECQALSLFASRRLIELELPTLKPGTEGAAALVELAANLAQQQDTFVLLHGPKAAR
EQTNSKWFKSLDKVGLHIQALTPEGSHYQRWIGERARRHKLNLSSSATQLIASMFEGNLM
AADQTMAQLGLISDGQRIEQTELQELLEDQSRYTVFQLVDALLAGQIPMAIKMLNQLQLE
DTAPTLIGWALSREFTTLCRLAKHLQEGQNRNAAMKTEKIWEKRQRLYGNCLDRITPAQL
GAALAAVGQLEQLIKLEGGSDAQQWLALADLCARFDGNYQPLAIAAAGLTG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatatttgcaagtcagttacagcgggagttaaccaagctgccgcaagtaatgatg
gtatttggtgacgacgttctgatccgcgaagagtgccgcgacaccatccgtgaacaactg
atgaaacgccaagggatcgaagagcgcttgtcgatggtgcaggaatcctccttcgactgg
caagggttgttgcaagagtgccaagccttatcgctatttgcttcccgccggctaattgaa
ctggaactaccaacccttaaacccggtaccgaaggtgctgcagcgctggtggaactggcg
gcaaaccttgcgcagcaacaagataccttcgtgttgttgcatggccccaaagccgcgcgc
gagcaaaccaacagcaaatggtttaaatccctcgacaaagtcggcttgcacatacaagca
ttaacccctgaaggcagccactatcaacgctggataggcgaacgcgcccggcgccataaa
ctgaatctatccagcagtgccacccaactcattgcgtcgatgtttgaaggcaacctaatg
gctgcggatcaaaccatggcccagcttggcctcatcagcgacggccaacgaattgaacaa
actgagctgcaagaattactggaagatcaaagccgctataccgtgtttcagttggtcgat
gcgctattggcagggcagatcccaatggcaatcaaaatgctcaatcaactgcaattagaa
gatactgcaccaacgttgattggctgggccctaagccgtgaatttaccaccttgtgccgc
ttggctaagcatctgcaagagggacaaaatcgcaacgccgctatgaaaacagaaaagatc
tgggaaaagcgccagcgtctctatggcaactgcctcgatcgcatcactccagctcaactt
ggcgcagcactggcagcggttgggcagctagaacagttgattaagcttgagggcggcagc
gacgctcaacagtggttagcactggcagatctgtgcgcccgttttgatggtaattaccaa
ccgctggccatcgctgctgcggggttaactggctaa
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