Ferrimonas lipolytica: HER31_15035
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Entry
HER31_15035 CDS
T06529
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HER31_15035 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fes03019
]
HER31_15035 (recQ)
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_15035 (recQ)
Enzymes [BR:
fes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HER31_15035 (recQ)
Messenger RNA biogenesis [BR:
fes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HER31_15035 (recQ)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HER31_15035 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
YscK
HEM4
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QIZ78098
UniProt:
A0A6H1UH00
LinkDB
All DBs
Position
complement(3305256..3307085)
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AA seq
609 aa
AA seq
DB search
MTSACIDAPSQSSTADHAKALLQQIYGYRDFRTGQLEVIEQVVSGQDCLVIMPTGGGKSL
CYQLPALMLPGLTIVISPLISLMKDQVDALRQSGVAAAALNSSLDREQVSQLFAAIHQGE
IKLLYVSPERLMSLQHSLEQWQLSMVAVDEAHCISQWGHDFRPEYAQMGWIKQRFPNVPV
MALTATADEATRHDIVERLSLNAPLRHLSSFDRPNIRYTVVEKLRPLAQLMTYLEQQKGN
AGIIYCGSRRRVDEVAEKLRKKGYAAAGYHAGMSSDERAHTQEAFLRERLDIVVATVAFG
MGINKSNVRFVVHWDLPKSIESYYQETGRAGRDGLEAEALLLFDPADIARVRHLLEQGEN
GANPVDLHKLNAMAAFAEAQICRRQVLLNYFNEPSHEPCGNCDICTDPPKQYDGSQDAQK
ALSCVYRVGQRFGVGHVIEVLRGSAAQTVQDRGHHKLTTWGIGKDKSHEHWLSVIRQLIH
HGLLLQDITRHSVLVLTSAARAVLKGERQLQLAEPRLTLTKSSGRKSRALPQQYDRRLFA
KLKNLRRTLADEAGVPPYVVFNDATLAEMAADMPTKPSELLAINGVGERKLDRFGAPFLT
LISDYIDNG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgcttgcatagatgctccatcccaatccagtactgctgatcatgccaaggcg
ctgctgcagcagatctatggttatcgagatttccgtacaggacagctagaggtcatagaa
caggttgtctctggtcaggattgtttggtgatcatgccaaccggtggtggcaagagtttg
tgctatcaattgccagcgttaatgctacctgggttaactattgtcatctcaccgttgatc
tcgttgatgaaggatcaggttgatgcgttgcgacaaagcggcgttgccgcggcagcgctc
aattccagccttgatcgagagcaggtaagtcagctattcgctgccatccaccaaggtgag
atcaagctgctgtatgtgtcgccggaacggttgatgtccttgcaacacagcctcgagcag
tggcaattgtcgatggttgcggtggacgaagctcactgcattagtcagtggggccatgat
ttccgccctgaatacgcccagatggggtggataaaacagcgctttcctaatgtaccggta
atggcactgactgccaccgccgatgaagcaacccgccacgacatcgttgagcgcctcagt
ctcaatgcaccgttgcgtcatctatcgagtttcgaccgtcccaacattcgctataccgtg
gttgaaaagctgcggccgttggcgcagttgatgacctaccttgaacagcaaaagggcaac
gctggcatcatctactgtggcagtcggcgtcgggttgatgaagtagctgagaagctgcgt
aaaaagggctatgcggcggcgggttatcacgccggtatgagtagtgatgagcgtgcccat
acccaagaggcgttcttgcgtgagcgtctggacattgtggtggcgaccgtggcgtttggt
atgggcatcaataaatccaatgtccgctttgtggtgcattgggatctgccgaaatcgata
gagagctactaccaagaaactggccgcgccgggcgagatggccttgaggcggaagcatta
ttgctgtttgaccctgctgatattgcccgggttagacatctgctcgagcaaggtgagaac
ggcgctaatccggtcgatctacacaagctaaatgcgatggcggcatttgctgaggcgcag
atctgtcggcgccaagtgctgttaaattacttcaatgagcccagtcatgaaccttgtggc
aactgcgatatctgtaccgatccgcccaagcagtacgatggcagccaagatgcacaaaag
gcgttgtcctgcgtttatcgagtgggacaacgctttggggttggccatgttatcgaggtg
ctgcgcggcagtgcagcacaaacggtgcaagatcgtggtcaccataagttgaccacttgg
gggattggtaaagataagagtcatgaacattggctatcggtaatccggcagctgatccat
catggcttgttattgcaggatatcacccgccattcggtattggtgcttacctccgccgcc
cgcgccgtgctcaagggtgagcgacagctgcaattggcagaaccccgcttgaccctaacc
aagagtagcggtcgtaaaagccgagcattgccgcaacaatacgatcgccgtctgtttgct
aagctgaagaacctccgccgtaccttagcggatgaagccggtgtgccgccttatgtggtc
ttcaacgatgctacgttggcagaaatggccgctgacatgccgactaaaccaagtgaactg
ttagccattaatggcgttggggagcgcaagctggatcgctttggtgcgccgttcttaacc
ttgattagcgattatatcgacaatggctga
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