Ferrimonas lipolytica: HER31_15135
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Entry
HER31_15135 CDS
T06529
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03420
Nucleotide excision repair
fes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HER31_15135 (uvrD)
03430 Mismatch repair
HER31_15135 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_15135 (uvrD)
Enzymes [BR:
fes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HER31_15135 (uvrD)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HER31_15135 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HER31_15135 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
SAP18
DUF7432
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QIZ78116
UniProt:
A0A6H1UIS4
LinkDB
All DBs
Position
3331726..3333900
Genome browser
AA seq
724 aa
AA seq
DB search
MSDTSTSPLLAKLNDKQRAAVEAAPGALLVLAGAGSGKTRVLTHRISWLLQEQGESPYAI
LAVTFTNKAAKEMRQRIEELSNAPMGRMWIGTFHGLAHRLLRAHHKEAKLPEGFQILDSD
DQQRLLKRIIRSLELDEKKWPPRQAMGYINAKKDEGLRPQHIDASFHPVERTWLKIYVAY
QEACDRAGLVDFAELLLRAHELWLNHPALLRHYQNRFRHILVDEFQDTNTIQYAWIRMLA
GNQNNVMIVGDDDQSIYGWRGAKVENLAQFLKDFPGAETVRLEQNYRSTGTILKAANALI
DKNSDRMGKELWTDDVDGDTISLYTAFNELEEARYIVGQIRKYQDEGGNLSDCAILYRSN
AQSRVMEEALLHRSVPYRIYGGLRFFERQEIKDSLGYLRLMTNRDDDAAFERVINTPTRG
IGTRTIDIIRSTARSEGVTLWQSCQRLLADSGLAGRAASAVRNFMELISTLEAETEQANL
KNTADHVIQHSGLLAMYQAEKGEKAEARVENLKELVTAAGSFIKPDDAEEMDDLNAFLAN
AALEAGERQAGESEDAVQMMTLHTAKGLEFPQVFICGVEEGLFPSQMALDEGNRLEEERR
LCYVGMTRAMKKLTLTHAESRRIYGRETLARVSRFVGEIPAQYLDEVRLTTQVSQPQQKG
RFNQSEQRFNETGFTLGQRVHHPKFGDGVILNFEGSGPQARVQVAFDGQGVKWLVVAYAR
LEPR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatacctccacctcgccacttttggccaagcttaacgacaaacagcgcgcggcc
gttgaagccgcaccgggggcgttgctggtgttagctggtgccggctcaggcaaaactcgg
gtactgacccatcgcatctcgtggctgctacaagagcagggagaaagcccttacgccatc
ttagcggtaacctttaccaataaagcagccaaagagatgcgtcaacgtatcgaagagcta
tccaatgcaccgatgggacggatgtggatcggcaccttccacggccttgctcaccgctta
ttacgcgctcaccacaaagaagccaagctacctgaaggcttccagatccttgatagtgac
gatcaacaacggctactgaagcggatcatccgcagcctagagctggatgaaaagaaatgg
ccaccacgtcaggcgatgggttacatcaacgccaaaaaagatgaaggcctacggccacaa
cacattgatgccagctttcatccggtggagcgcacctggttaaagatctacgttgcttac
caagaagcctgtgaccgagctggtttagtcgactttgccgagttgctattgcgcgcccac
gaattatggcttaaccaccctgcgctgctgcgccactaccaaaaccgtttccgccatatt
ctggtggacgagttccaggataccaacaccatccaatacgcgtggatccgtatgttggcg
ggtaaccaaaacaacgtaatgattgttggcgacgacgatcaatctatctatggctggcgt
ggcgccaaggtggagaacctagcgcagtttttgaaggacttccctggtgcagaaacggtc
cgcttggagcaaaattaccgctctaccggcaccatattgaaagccgccaacgccctgatc
gacaagaacagcgatcgcatgggcaaggagctgtggaccgacgatgttgatggcgacacc
atcagcctctataccgccttcaacgaactggaagaggcgcgctacatcgttggccagatc
cgtaagtatcaagatgaaggcggaaacctgtctgactgcgccatcctataccgttccaat
gcccaatcgcgggttatggaagaagcgttgctgcaccgtagtgtgccgtaccggatctac
ggtggcttgcgtttcttcgagcgccaagagatcaaagactccctcggctacctgcgtttg
atgaccaaccgtgatgacgacgccgctttcgagcgggttatcaataccccgacccgaggg
atcggcactcgaaccatcgacatcatccgctccactgcccgcagcgaaggggttaccttg
tggcaatcatgtcagcgactattggctgacagcggcttggccggtcgtgccgccagcgcg
gtccgtaactttatggagctgatcagcacactggaagcggaaacggaacaggccaacctg
aaaaacaccgccgatcacgttattcagcattccggtttactggcaatgtaccaagcggaa
aagggcgaaaaggcggaagcacgcgtagaaaacttaaaggaattggttaccgccgcaggt
tcatttatcaagcccgatgacgccgaagagatggacgatcttaacgctttcttagccaac
gccgcgctggaagccggtgaacgccaagccggtgagtcggaagatgcggtacagatgatg
accctgcacaccgctaaaggtttggagttcccgcaggtgtttatctgcggcgttgaagaa
ggattgttcccatcgcagatggcacttgatgagggcaaccgcctcgaagaggagcgtcgc
ctttgttacgtcggcatgacccgagcaatgaaaaagctcactctaacccacgcggagtca
cgacggatctatggccgtgagaccctagctcgggtaagccgctttgtcggtgagatccct
gcgcaatacctcgatgaggttcgcctcactactcaggtttcacagccgcagcaaaaggga
cgctttaaccagtcggaacagcgctttaatgaaaccggcttcaccttaggacaacgggta
catcaccctaagtttggcgatggcgttatccttaacttcgaaggctcagggccacaggct
cgggtacaagttgcctttgatggccaaggagtgaagtggttagtggtcgcttatgctcgg
ttggagccgagatag
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