Ferrimonas lipolytica: HER31_16095
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Entry
HER31_16095 CDS
T06529
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03030
DNA replication
fes03410
Base excision repair
fes03420
Nucleotide excision repair
fes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HER31_16095 (polA)
03410 Base excision repair
HER31_16095 (polA)
03420 Nucleotide excision repair
HER31_16095 (polA)
03440 Homologous recombination
HER31_16095 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fes03032
]
HER31_16095 (polA)
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_16095 (polA)
Enzymes [BR:
fes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HER31_16095 (polA)
DNA replication proteins [BR:
fes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HER31_16095 (polA)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HER31_16095 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HER31_16095 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIZ78282
UniProt:
A0A6H1UKF1
LinkDB
All DBs
Position
complement(3558256..3561006)
Genome browser
AA seq
916 aa
AA seq
DB search
MSDQPLILVDGSSYLYRAFHAPPHLTNSAGEPTGAVYGVVNMLRSLVRQYKPTHMAVVFD
AKGKTFRDEMYSDYKAQRPPMPDDLRSQIAPLHAIIDAMGLPMIVHSGVEADDVIGTLAR
QGEAAGYDVLISTGDKDMAQLVTDKITLVNTMTDTVLDPAGVVEKFGVGPDLIIDLLAMM
GDKVDNIPGLPGVGEKTALAMLQGIGSLEQIYQDIDAVVPLGFRGSKTMPKKLAEHKDAA
FLSYQLATIKIDVELEQGPNDLDIKAANNDELAKLYGQMEFRRLLAEVLDNGAAAPAATK
VDVQTGEVATVEAIEVDYQTILTEAQLDQWIAKLTDAELYAVDTETTSIDYMAAKLVGLS
FSVKAGEAAYLPLAHDYDGAPVQLDFDATLAKLKPLLEDDSPKKIGQNLKYDMSVLANYG
ITLRGVAFDTMLESYCYNSTAGKHNMDDLALKYLGHKTIKFEEIAGKGVKQKTFNQIELE
QAAPYAAEDADITLRLHQTLQPLLASVPSCEAVFNEIELPLVTAMSTMERNGVMVDGDML
HQQSSTIAMRLNELEAEAHNIAGEVFNLASTKQLQTILFEKLEYPVLKKTPKGAPSTAEE
VLQELALDYPLPKLLLEHRSLAKLKNTYTDKLPELITAAGRIHTSYHQAVTATGRLSSSN
PNLQNIPIRTEEGRRIRQAFIAPAGYKLLAIDYSQIELRIMAHLSADKGLLDAFAHGKDI
HRATAAEVFDVEFDDVTTDMRRKAKAVNFGLIYGMSAFGLAKELNIPRYEAQEYIDKYFD
RYPGVLKYMDDTRAQAHDQQFVETLFGRRLHLPEINARNKMRQQAAERTAINAPMQGTAA
DIIKKAMLLVHQYINNQEPAEIKLLMQVHDELVFEIEEGVIEKHQAHLVKLMESAAELAV
PLIAEAGLGDNWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccaacccctgatcctcgtcgatggctcctcctatttataccgcgccttccat
gcgccaccacacctaaccaactcagcaggagagccgactggagcggtttatggcgtggta
aacatgttgcgcagcttagtgcgccaatataagcctactcatatggcggtcgtgtttgac
gccaaaggcaaaacctttcgcgatgagatgtacagcgactacaaggctcagcgtccaccg
atgcctgacgatttgcgcagccaaatcgcaccgctgcacgccattatcgacgccatgggg
ctgccgatgattgttcactctggcgtcgaagccgatgacgttattggtaccttggcgcgc
caaggggaagccgctggctacgacgtattgatcagcactggcgataaggacatggctcag
ctggtgaccgataagatcactttggtcaataccatgaccgacaccgtgctcgatccagct
ggtgtggtagagaagtttggtgtcggccccgatctaatcatcgatctgttggcgatgatg
ggcgacaaagtcgacaatatcccgggcttacccggtgtcggtgagaaaaccgccttggca
atgttgcaagggatcggcagcttagagcagatctatcaagacattgatgctgtggtacca
ctaggtttccggggcagcaaaaccatgcctaaaaagctggctgagcacaaagatgcggca
ttcctatcttaccaattagccaccattaagattgacgttgagctcgaacagggccccaat
gatcttgatatcaaagcggccaacaatgatgaactggccaaactgtatggtcagatggag
ttccgtcgcttattagctgaagtgctcgataacggtgcggcggcacctgctgctaccaaa
gtggatgtgcaaaccggtgaagtggcaacggttgaagcgatcgaggtcgactatcaaacc
attttgaccgaagctcagctagatcagtggatagccaaactgacagacgccgagctgtac
gccgttgataccgaaaccaccagcatcgactacatggcagccaaactggttggtttatca
ttttcggtaaaagccggtgaagcagcttacctgccattggcccacgattatgacggcgcc
ccagtacaactagatttcgacgccactttagctaagctcaagccgctgctggaggatgac
tctccgaaaaagattggccaaaacttaaagtacgatatgtcagtactggccaattatggc
atcaccctacgcggcgttgccttcgataccatgttggagagttactgctacaactccacc
gccggtaaacacaacatggatgacttggcgctgaagtacctcggccataagaccatcaag
tttgaagagatagccggtaaaggggttaaacagaaaaccttcaaccagatcgagctggaa
caagcggcgccttatgctgcagaagacgctgacatcaccctacgtctccaccaaaccctg
caaccactgctggccagtgtgccaagctgtgaagcggtatttaatgagattgagctgcca
ctagttactgccatgtcaacgatggaacgtaatggggttatggttgatggcgatatgctc
catcaacaaagcagcaccattgcgatgcgtttaaatgagcttgaagccgaagcccataac
attgccggtgaagtctttaatctggcctcgaccaagcaattgcaaaccattctgtttgaa
aagctcgagtacccagtactaaagaaaacccctaagggagccccctctaccgcagaagag
gtgctgcaggagttagcgctggattacccactgcccaaactgctattggaacatcgctca
ctggccaagctgaaaaacacttataccgataagttacctgagctgatcactgctgcggga
cggatccacaccagttatcatcaagcggtaactgccaccggcaggctttcgagttcaaac
ccaaacctgcagaacattccaatccgtaccgaagaaggacgccgtattcggcaagctttt
attgccccagcaggctataagctactggctatcgattactctcaaatcgaactgcggatc
atggcccatctctctgcagacaaagggctgttggatgcctttgctcatggcaaagatatc
catcgcgccactgctgctgaagtgtttgatgtcgaatttgatgacgtaaccacagatatg
cgtcgcaaggccaaagcggttaactttggtttgatctatggcatgtccgcctttggttta
gccaaagaattgaatattccacgttatgaagcgcaggagtacatcgataaatacttcgat
cgctaccctggggtactgaaatacatggatgacacccgtgcccaagcacacgatcagcag
tttgttgaaaccctgtttggccgtcgcttgcatctgcctgagatcaacgcccgcaacaag
atgcgccaacaggcagccgagcggacagccatcaacgcgccaatgcaaggaaccgcggct
gatatcatcaaaaaagcgatgttgctagtacaccaatacatcaacaaccaagaacccgct
gagattaagctattgatgcaggtacacgatgaattggtgttcgagattgaagagggtgtg
attgaaaaacaccaagctcatttggttaagttgatggaatcagcggcggaattagcagtc
ccactgatcgcagaagcgggcctaggcgacaactgggacgaagctcactaa
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