Ferrimonas lipolytica: HER31_16865
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Entry
HER31_16865 CDS
T06529
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fes03016
]
HER31_16865 (trmA)
Enzymes [BR:
fes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
HER31_16865 (trmA)
Transfer RNA biogenesis [BR:
fes03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HER31_16865 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
Methyltransf_4
Methyltransf_31
Methyltransf_11
MTS
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
Methyltransf_12
DREV
Motif
Other DBs
NCBI-ProteinID:
QIZ78427
UniProt:
A0A6H1UH46
LinkDB
All DBs
Position
complement(3716029..3717120)
Genome browser
AA seq
363 aa
AA seq
DB search
MDLSALDPSQYESQLATKCDRMRELFAAHATPELQVFRSEPKHYRMRAEFRIWHDGDDLN
YIMFDQQTKQRIAITQFLPASTLINEYMIKLREALLPNPTLRFKLFQVDFLSTLSGELVI
SLLYHRQLDQEWETEINKLKQLWGDKVSFIGRAKKQKLVIDRDYADELLHVHGQPLNYRQ
IENSFTQPNGKVAVKMLEWAIDATRNSSGDLLELYCGNGNFSLALAQNFERVLATELAKP
SVQAAQHNIAANNINNVTIIRMSAEDFTDAMNGVREFNRLKGIDLTAFNCNTIFVDPPRS
GLDSETEKMVQGYERILYISCNPETLLENLKTLGQTHKITQFALFDQFPYTHHMEAGVLL
ERK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtcagccctcgatcccagccaatatgaatcgcagttagcgactaagtgcgat
cgtatgcgtgaactgtttgctgctcacgccaccccagaactgcaggtgttccgctccgag
cccaagcactaccgcatgcgtgccgaatttcgcatttggcacgatggtgatgatcttaac
tacatcatgtttgatcagcagactaagcaacgtattgcgatcacccagtttctgccagcc
agcacgctaatcaatgaatatatgattaaactgcgggaagcattgctaccgaaccctact
ctgcgcttcaaactgttccaggttgattttctctcaacactaagtggtgagctggtgatc
agcctgctataccaccgtcagctagaccaagagtgggaaactgagatcaataagctcaag
caactgtggggcgataaggtttcatttatcggccgcgcgaagaaacagaagctggttatt
gatcgggactatgcagatgaactactgcacgtacacgggcaaccgttaaactaccgccag
atcgaaaacagcttcacccaacctaatggtaaggtggcagtaaagatgttggagtgggct
atcgacgcaactcgtaacagtagcggcgacttactggaactatactgtggcaacggtaac
ttctcgttggcgttagcgcaaaacttcgagcgggtactcgcaaccgagctagctaagcca
tcggttcaagcagcgcaacacaacatcgcagcaaacaacatcaacaacgtcaccatcatt
cgtatgtcagcagaagattttactgatgctatgaatggcgtgcgtgagttcaaccgcctt
aaagggatcgatctgaccgcctttaactgcaacactatcttcgtcgatccgccgcgttct
ggcctagacagcgaaaccgaaaagatggtgcagggctatgagcgaattctatatatctcg
tgcaacccagaaaccctactggagaacctgaagaccttgggccaaacccataagatcacc
cagttcgcgttgttcgatcagttcccatacacccaccatatggaagcgggtgtactacta
gagcgcaagtag
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