Formica exsecta (narrow-headed ant): 115233199
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Entry
115233199 CDS
T07422
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115233199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115233199
Spliceosome [BR:
fex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115233199
Complex C
U5 SnRNP specific factors
115233199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
TPR_17
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
ARM_TT21_2nd
DUF4404
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
115233199
NCBI-ProteinID:
XP_029659359
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAVPPVSLNTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT
KRAKKKEEEEEDEEDLNDNNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK
EYREKRLREELERYRQERPKIQQQFSDLKRELVNVSEDEWKNIPEVGDARNRKQRNPRAE
KFTPLPDSVLARNLGGETSTSIDPTSSLASMMPGVATPGMLTPTGDLDLRKIGQARNTLM
NVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA
WIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPDTAKAVIAQSVRHIPT
SVRIWIKAADLEMEMKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCP
TSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRAI
SSLSANGVEINRDLCPLLFVSVQKRRVTLEPSAHR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcccccggtttcattaaatacgcgaaataaaaagcactttttgggtgtaccg
gcacctttgggatatgttgctggtgttggaagaggagctacaggatttacaacacggtct
gatatcggtcccgctcgagatgctaatgacgtttcagacgatagacacgctccacccacg
aaacgtgcaaagaagaaggaagaagaggaagaagatgaagaagatttaaatgataacaat
tacgatgaattttcaggatatggaggttccctatttagtaaagatccttacgataaagat
gacgaagaagcagatgcaatttatgaagctatcgataaacgtatggatgagaaacgtaag
gaatacagagaaaaacgtctcagggaagaattggaacgctatcgtcaagaacgtcctaaa
attcagcagcagttctcagacttgaaaagagaattggttaatgtgtcagaagacgaatgg
aaaaatattcctgaagtaggagatgctagaaatcgtaaacagcgtaatccaagagcggaa
aaatttaccccattaccagattctgtcttagcgaggaatttaggtggtgaaacatccact
agtattgatccgactagcagtttggcctctatgatgccaggtgtggcaacaccaggtatg
ctaactcccacaggggatcttgacctcaggaagattggacaggccagaaatacattgatg
aacgtcaaactgaatcaagtttctgattctgtggagggccaaactgtagttgatccaaaa
ggataccttacagatttgcaaagcatgatacctacttatggcggtgacataaatgacata
aaaaaagccagattattgttgaaatccgtcagagagactaatcctaaccatccccctgca
tggatcgcgtctgcgcgtttagaagaagtgacaggaaaagttcaagcggcaagaaattta
ataatgaaaggttgtgaggtaaatcccacttctgaggatctgtggttggaagctgcgaga
ctgcagccgccggatacggcgaaggcggtgatagcacaatcagtgcgacacattccaaca
tctgtcagaatctggataaaggccgcggatttggagatggagatgaaagcgaaaagaaga
gtgtatcgaaaggccctggaacatatcccgaattcagtgcgattatggaaagccgccgtc
gaattggaggagcccgaggacgcacgtatcttgctcagtcgtgcggttgaatgttgtccg
actagtgtagatttatggctcgctctcgctagattagaaacctacgataatgcgagaaaa
gtcttgaacaaggcccgagagaatatcccgacagatagacaaatttggactaccgccgcg
aaattggaagaggcaaatggcaataagcacatggtagagaagatcatcgatcgcgctata
tcctcgttgagtgcgaacggggtagagatcaacagggacctgtgtcctctcctttttgtt
tcagtgcagaaacggcgcgtgacgctcgagcccagtgcccatcgataa
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