Formica exsecta (narrow-headed ant): 115233718
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Entry
115233718 CDS
T07422
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115233718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115233718
03041 Spliceosome [BR:
fex03041
]
115233718
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115233718
Spliceosome [BR:
fex03041
]
Complex B
Other components
Prp19-related factors
115233718
Complex C
115233718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
NRDE-2
Microp_apicomplexa_6
ATG1-like_MIT2
TPR_2
Motif
Other DBs
NCBI-GeneID:
115233718
NCBI-ProteinID:
XP_029660132
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSFISTYGIGFKTIPDRFTTSKKAHSIILYIYIIITRDITHDEENLYAFNEEDLPYEEEI
LQNPFSVKHWQRYIDHLKNSKSKNLNVVYERALKELLGSYKLWYNYLRQRMSQLKDRCIT
DPLYEDVNNAFERALVFMHKMPRIWMDYCTLMTEQCYITRQVFDRSLRALPITQHHRIWP
LYINFLKKHNVYETAVRVFRRYLKVRTLIYFIFLILHMFIIQTCKAVYDKIIDLKIATPQ
IIINYGLFLEENNYFEEAFRAYEKGIALFKWPNVYDIWNTYLTKFLTRYGGTKLERTRDL
FEQCLEHCPPKYAKALYLLYAKLEEEHGLARHAMSVYERATNAVLLEEKFDMFNIYIKKA
ADIYGVPKTRQIYEKAIEDLNDENTREMCLRFAEMETKLGEVDRARAIYAYCSQICNPRM
YQLKNELYHHKYLVV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcatatccacttatggaattggatttaaaacgattccggatcgatttactacc
tcaaaaaaggcacatagtataattttatatatatatataattataacaagagacataaca
cacgacgaagaaaatttatatgcctttaatgaggaggatttaccatacgaggaagaaatt
ttacaaaatccattttcagttaaacattggcaacgctatatcgatcacctaaaaaattca
aagagtaagaatttaaatgtagtatatgaacgagcgttgaaagaacttctaggcagttat
aagttatggtataattatcttcgacaacgtatgagccagttaaaagatcgatgtataaca
gatccgttatatgaagatgttaataatgcatttgaacgtgctttggtatttatgcataaa
atgccacgcatatggatggactattgtacactaatgactgaacaatgttatataacacgt
caggtatttgatcgttctcttagagcacttcccatcactcagcatcatcgtatatggcca
ttatatattaatttcttaaagaaacataatgtttatgagactgctgtcagggtctttaga
agatatttaaaggtaagaacactaatatattttatatttttaattttacatatgtttatt
atacagacttgtaaagcagtatatgacaaaataatcgacttgaaaattgcgactcctcaa
attatcattaattatggactatttctagaagaaaacaactactttgaggaagcatttaga
gcatatgaaaaaggtattgcattgtttaagtggcctaatgtctatgatatttggaataca
tatctcacaaaatttttgactcgttatggtggtacaaaattagaacgtaccagggatcta
tttgagcaatgtttagaacattgtccaccaaaatatgccaaagccttatatttattgtac
gcaaaattagaagaagaacatggcttagcaagacacgctatgtctgtatatgaacgagcg
acaaatgctgttcttctggaagagaaatttgatatgttcaatatatatataaagaaagct
gcagacatatatggagtgccgaaaactcgacagatatacgaaaaggccatagaagactta
aatgatgagaatactagagaaatgtgtttacgattcgcagaaatggagaccaaattagga
gaagtagacagagcgagagcgatatacgcatattgtagtcaaatatgtaatccaaggatg
taccaattgaaaaacgaactataccatcacaagtatttggtagtttaa
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