Formica exsecta (narrow-headed ant): 115234698
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Entry
115234698 CDS
T07422
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115234698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115234698
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115234698
Spliceosome [BR:
fex03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
115234698
Complex B
115234698
Complex C
U2 SnRNP specific factors
115234698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
MscL
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115234698
NCBI-ProteinID:
XP_029661847
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MSYHRGSGNKPKGFGFAGFQMSGTKRSGTNIPPPPPNSALSKQGYHTMNAITENALSACW
GMPKKRSKTEEEYFEDDDEPPTSSLEYIPAPGSPTYDLMKKSATKDESDGEEDPLDAFMA
GIDAEVKRNSCAAQGSDDRKEDKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQE
IEYDEDGNPIAPPKKKEIDPLPPIDHSEIEYEPFDKNFYNVHEEIASLSKQQVDDLKNTL
GIKVSGPSPPNPVTSFAHFGFDDALIKTIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKT
GSGKTAAFIWPMLVHIMDQRELKTGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCC
CYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATNLARVTFLVLDEADRMFDMGFEP
QVRSICNHVRPDRQTLLFSATFKKKVEKLARDILTDPIRIVQGDVGEANTDVTQHVIMFH
NNPSGKWNWLLQNLVEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIERN
KVITAFKKKDVSTLVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTA
YTLVTEKDKEFAGHLVRNLEGANQEVSKSLMDLALQSAWFRKSRFKSGKGKSLNIGGAGL
GFRGRPESSSSGGSSSTQASKDISEVVKKLERHGPGSDRLSAMKAAFRSQYTSQFRASSD
HTWEQTITPPSVIMPPPPTVPPPKPAAQDNTQASNSTEPERKRVRKSRWE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaccgaggaagtggtaataagccaaaaggttttggctttgctggctttcaa
atgtctgggacaaaaagaagtggtactaatatacctccacctccgccaaactcggccttg
agtaaacaaggttatcacacaatgaatgctattacagaaaatgctttgtccgcttgttgg
ggtatgcctaaaaaacgcagcaaaacagaagaagaatattttgaagatgatgatgaaccc
ccgacttcatcattggaatatatacctgcacctggttctcctacatatgatttaatgaaa
aaatctgcaacaaaagatgaaagcgatggtgaagaagatcctttagatgctttcatggcc
ggaattgatgcagaagtgaagcgaaacagttgtgcagctcaaggtagtgatgatcgtaag
gaagacaaatcaaaaggatttcgggcagacattgatggagaagatgatgaggagagttac
tataggtatatggaagagaatccaactgctggtttgcaacaagaagaatccgatcaagaa
attgaatacgatgaagatggtaatcccattgcgccaccaaagaaaaaagagattgaccca
ctacctccaatcgatcacagtgaaatagaatacgaaccatttgacaaaaatttttacaat
gtgcatgaagaaattgcaagcttaagtaaacaacaggttgatgacttgaaaaatactttg
ggtataaaggtatccggaccatctccgcctaatccggtcacaagtttcgcccatttcggc
tttgatgacgcgctgataaaaactatccgtaaaaatgaatacacgcagcctacacctatt
caagctcaagcggttcctgctgctttgagtggacgagatataataggtatagcaaaaact
ggtagcggtaaaacagcggcatttatctggccgatgttagtgcatattatggatcagcgt
gaattgaaaactggagatggtcctatcggtcttatcttggcaccgacgagagaattatct
caacaaatttatcaagaagcgaagaaatttggaaaggtttacaatatccaagtgtgctgt
tgctatgggggcggtagtaaatgggagcagagcaaagcgttggaaagcggcgcggagatt
gtggtcgctacccctggtagaatgattgatcttgttaaaatgaaagcaacgaatttagct
agagttacatttttggttctggatgaagccgatagaatgttcgatatgggatttgaacca
caagtacgctctatctgtaatcacgtgaggcccgacagacaaacattgctgttcagtgcg
acattcaaaaagaaagtagaaaaacttgctagagacattttaacagatcctattagaata
gtgcaaggtgatgtcggtgaggccaacactgatgtgacgcaacatgttatcatgtttcat
aacaatcctagtggtaaatggaattggctgttacagaacttggttgaatttctaagcgct
ggcagtcttttaatctttgtcactaagaagctgaacgcggaagaacttgccaataatctc
aaattgaaagaatttgatgtattgcttttgcatggtgatatggatcaaatcgagagaaat
aaagtgattacagcttttaaaaagaaggatgtcagtaccttggtcgctactgatgtagct
gcgcgaggtttggatattccacatatcaagactgtcgtaaattacgatgtagcgcgagat
atcgatactcacacgcatagaataggaagaactggacgagctggtgagaaaggtacagcg
tatactcttgtaactgaaaaggataaggagtttgccggacatttagtaagaaatttggag
ggagcgaatcaagaagtgtcaaagagcttgatggatttggccttgcaaagcgcatggttt
aggaaatcaagattcaaaagtggaaaagggaagagtttaaatatcggtggagccggactt
ggcttcagaggcagaccagaatcgtcgagttcgggtggatcatcgtcaacgcaagcgtcc
aaggatatcagtgaggtagttaaaaaattagaaagacacggacctggtagcgatcgactc
tccgctatgaaagctgctttccgaagtcaatatacttctcagttccgagcatcgtcagat
catacttgggaacagacaatcactccaccttctgtgataatgccgccaccgccgaccgta
ccaccaccgaagccagcagctcaggataacactcaagcctccaattccacggaaccggag
cgtaaaagagtgcgaaaaagtcgatgggagtga
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