Formica exsecta (narrow-headed ant): 115234795
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Entry
115234795 CDS
T07422
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115234795
Spliceosome [BR:
fex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115234795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
ARM_TT21_5th
TPR_19
TPR_11
NRDE-2
PPTA
DUF3203
HAT
Motif
Other DBs
NCBI-GeneID:
115234795
NCBI-ProteinID:
XP_029661992
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MSSASGDEAELTLAEPVRRRSGRVRKTTVVAKKSPVKKLLARATRSPRKIHEIEEPEEEV
PTLEEGIMENMPENGVQRLSDIIIEQRSEEDTPMLHLELEDSEDTNIHEISMSQSEEIEQ
DVEDMGHSNIRSEDIIIEDSSMDKVEMLTEDIEMEGQDIGNNDLNQQHVLFDFQKVINEV
KEAINGNTMTILETEEVDSEISTDTATRIQVMEVEDSKQEISEDVDTVISKVEPDMEISQ
SDSLPRIEITEAVEDDADDDAKKTEPDMEAVSEDELPNEATTKEPETEAVSDEELPVAAP
ADLGETESVSEDELPPDSDKKKKGAKLNKTPEKKTKTEAGTKRKLNAEGEYDPSSPTSEN
NDEAPAKKVALSNEADTGDKQETKPASPKKKTLPELEKYWKAVNEDPSDFTGWTYLLQYV
DQENDAEAAREAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQTVFDQGLKAISLSVDL
WLHYINHCKTVYEKDEEKLREQYERAIQACGLEFRSDRLWESYIKWELEGKRLSRVTALY
DRLLSTPTLGYISHFEAFQEFVSSNLPNRILSVDDFLALRAEVKALLKSDDTTATSAADD
APPGEEPPPHEVPPTDEETRAIREKIISSRRKMHKANVNAVAARWSYEEGIKRPYFHVKP
LERCQLKNWKEYLDFEIEQKDQNRIIILFERCLIACALYDEFWMRFVRYLESLKGDNTEK
IRDVYSRACMVHHPKKPNLHLQWAIFEEGQDNFEKAAAILENIDNALPNMLQVAYRRINL
ERRRGDLEKACTLYENYISNSKNRTIANNIVVKYARFLCKVKNDVDKAIKVLMKATDKDK
DNPRLYLQLIDLAMQRTPVDTLEIVGYMDMFIEREHADLEQRVLFAQRKVEFLEDFSPDI
RQVLKAHEQFQKCIKQAKERKKTKGEDNKTDSSPPKKVKTDQSNVPPPPSVGSQSSYQYS
SGPSGPYQSPQQFQGGQYSGQGGYQQGYQQYPPPSDPNYANYQNWQYGQGGPQAYGPYNQ
WGSYNYY
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcaagcggtgatgaagccgagctcacgctggctgaaccagtgagacggagg
tcgggtcgagttcggaaaacgacagtagtagctaaaaaatcaccagtgaagaaacttctt
gctagggcgacgcgctctcccagaaaaattcacgagatcgaagagcctgaggaagaagta
cctactttggaagaaggcataatggaaaatatgcctgagaatggagttcaacggttatca
gacattattattgaacaacgcagtgaggaagatacgcctatgttgcacttggaattggag
gattctgaagacactaatatacatgagataagcatgagtcaaagcgaagagatagagcaa
gatgtagaagacatgggccactctaacataagatcagaagacataattatagaggatagt
agcatggacaaagtggaaatgctgaccgaagacattgagatggagggtcaagacatcggt
aataatgatttaaatcagcaacatgtactgtttgattttcaaaaagttattaatgaagtt
aaagaagccattaacggcaatacaatgacgatcctagagacagaagaggtagattcggag
atatccacggatactgctaccagaattcaagttatggaagttgaagattcaaaacaagaa
atatcggaagatgtagacacagttataagcaaggtagaacctgatatggaaatatcgcaa
agtgattctctcccacgtatagagataaccgaagccgttgaggacgatgccgatgatgat
gcgaagaaaacggaacctgatatggaagcagtgtcagaagatgagttaccgaatgaagcc
actacaaaggagcctgagactgaagcagtttctgacgaagaactgccagtcgctgcccca
gcagacttgggtgaaactgagtctgtatccgaagacgaattaccaccggacagtgacaaa
aagaaaaagggggcgaaattgaacaaaacgcctgaaaagaaaaccaaaacagaagctgga
accaaacgtaaattgaacgcagaaggagaatatgatcccagttctccaacatctgagaac
aatgatgaggcacctgcaaagaaggtcgctttatcgaatgaagcagatacgggagataag
caagagaccaagccagcatcgccgaaaaagaaaacactacctgaattagaaaagtattgg
aaagccgtcaacgaagatccgtctgactttacaggatggacatatcttttacaatatgtt
gatcaagaaaatgatgcagaggctgcacgcgaagcttataccaaattcttggagcgttat
ccgtattgctatggttattggagaaaattcgccgattacgagaagaagaagggcaacccc
gaaaatgtccaaacggtgttcgatcaaggtctgaaagctatttcgctaagtgtcgaccta
tggctccattacatcaaccactgtaaaaccgtctacgaaaaggatgaagaaaagctccgg
gagcagtatgaaagagctatacaagcttgtggacttgaattcagatcagatcgtctctgg
gagagctatataaagtgggaattggagggaaaacgtttgagcagagtaacagcgttgtat
gatcgcttattatcgacgcctacccttggctacatttcccacttcgaggcattccaggaa
ttcgtatcgtccaatttaccgaatcgcatcctaagtgttgatgatttcctcgcgctgcgt
gctgaagtgaaagccctcctcaagtcggacgataccaccgcaacatccgctgccgatgat
gcgccacccggcgaggaaccgccgccccatgaagtaccgcctaccgatgaagagacacgt
gccatccgtgagaagatcatcagcagcagacgcaaaatgcacaaggcgaacgtcaatgcg
gtggcagcgaggtggtcctatgaggaagggataaagagaccctatttccatgtaaaacca
ttagaacggtgccagttgaaaaactggaaggaatatctcgattttgaaattgaacaaaag
gatcaaaatcgaataattatcttattcgaaagatgtcttatagcttgtgcactttatgat
gagttttggatgcgatttgtacgctacttggaatcattgaagggtgataacacagaaaaa
atccgagacgtatattcgagagcttgtatggtgcatcatcccaagaaaccgaatttgcat
ttgcaatgggcgatcttcgaagagggtcaggataacttcgagaaagccgccgctatatta
gaaaatattgataatgcattaccaaatatgttacaagtggcataccgacgaataaacttg
gaacgtcgtcgtggagacttggagaaagcatgtacattatacgagaattacattagcaat
agcaagaaccgaacaattgctaacaatatcgtcgtgaaatacgcgcggttcctatgtaaa
gttaagaatgatgttgataaggcgatcaaagtattaatgaaggccacggataaagacaaa
gataatcctagattatatctgcagttaatagacttggcaatgcagcgaacgccagtcgac
accctagaaatagtaggttacatggacatgtttatagaaagagaacatgcggatctcgaa
cagagagtacttttcgcacaacgtaaagtagaattcctagaggattttagtcccgacatt
cggcaagtgttgaaagctcacgaacaattccagaaatgcatcaaacaagcgaaagaaagg
aagaagacgaagggcgaggacaataaaaccgattcttcgcctccgaagaaagtgaaaact
gaccagtcaaatgtgccacctcctccgtccgtgggttcacagtcttcataccagtacagt
agtggtccgagtgggccctatcagtcgccacaacaatttcaaggtggacagtacagtggt
cagggtggctatcaacaaggttaccagcagtacccacctccatcggatcccaattatgcc
aattatcaaaactggcagtatggtcaaggcggaccgcaagcttatggaccttacaatcaa
tggggatcttacaattattattaa
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