Formica exsecta (narrow-headed ant): 115234888
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Entry
115234888 CDS
T07422
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex04120
Ubiquitin mediated proteolysis
fex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115234888
04120 Ubiquitin mediated proteolysis
115234888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fex04121
]
115234888
Enzymes [BR:
fex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115234888
Ubiquitin system [BR:
fex04121
]
Ubiquitin ligases (E3)
U-box type E3
115234888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Filament
Motif
Other DBs
NCBI-GeneID:
115234888
NCBI-ProteinID:
XP_029662129
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MLSKKTKSRKKTAAAASSATNVPSSTTIAASSSWSSMQSPPSTLTPIVSRQPGSPLSLSD
RASYIEAIRYLECENSRLKREMQTTQETVTREISNIEAVYSLVLSNKRKLLDEADTERVK
LELNIKRLRDDNGDLKSKLEKKTKDLQIAERNAIIHEKRSDLQSPAKLTEKDQDSKKESD
RSKALLDALKHQEKERIDFANVIISRVLCISWEKPIEGRIFLPQTAAYTQTQRLLDFSDI
INQALMEILCIFSREEDPLKDITVDTSSDREDSPNSQASPLISPAVAPSFYQLPTIPLFI
GDSSSQPKSFTYLLDCYSRIAIEERNHEEQSSVPPLSDVLTILRAQCVQYSSLVLQGLIG
ICQAAVIPKCTIHLLYPILSQNLPRGYLCELVVRTHTNPNTFNKIFTPVLQGLYLAMQQT
SLSLDDNMHRPIEALGELIEIRCGPSGNIRPICRLITNQVQFLPDVTSAAGRELIKTSFL
GPFLSLSVFAEEQPKMMEFFSGDYQIDVAKEFFLQYQLEITRQSLHKIFDAILANSNCRD
ATLAYLAALLRHNEKRAQIQTEEDSSFLAGDGFMLNLLSILQMLSVKIKLDTVDPLYPFH
PSSFVEIKNDTRLKLTSQEIAEWQQYLESTHKXTEPNFSTQCWFLTLHYHHIALLPALQN
YRRKLSALKDLQKMLCELQVTEPQWRDSPIAEHNKDLIKEWKQQLKRLVKSTSCTTTGVN
HCILLKRCLHFYISVAEFLLSLLTQTASSNPLPELPLLQEITCKFTALPEWYMEDIVEFL
LFTFKYYKLSQVNWNEVDKSPLITLLLVVVCTPHCIRNPHLIAKIIKLLYNIYLLYKDQV
TLKSAYKLKMENTFGHKVMAHPISKTFLALSLMKFCTDVELIDTNSEFEDKFTIRYHISV
ILNWMWDNPMHRASIVNESNNGKHFVKFINILMNDTTFLLEEALEYLNYILEMEEFMSDT
IAWNAVSHEEQQSSTRQLVADEEKVRFSLKLVKEIVAMFHYLTVDIKKPFLRPELVGRLC
AMLNSNLQQLCGPKYENLRERKLEKYGWQPRTLLSQLVDIYLHLDCDDFVAALASDEHLF
CNELFTDAANKLERSAIKTTTEIDRFVALAERAAVIARDNRARGDAPEEFRDPLMDTLME
DPVKLPSGIVMDKAVIIRHLLNSATDPFNRQPLSEDMLTPSKYMYCSYFFLF
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcttagtaaaaaaactaagtctaggaagaagacggcagccgccgcgtcctccgcgaca
aacgtcccgtcctccacaacaatcgccgcctcgtcgtcgtggagtagtatgcaatcgccg
ccgagcacgttgacgccgatcgtcagccgacagcctggcagcccgctcagcctcagcgat
cgggcatcttacatcgaagcgatacgttacctcgaatgtgagaactctcggttgaagcgg
gagatgcaaaccacccaggaaaccgtcactcgggagatatccaacatcgaggccgtgtat
agcctcgtactctctaacaagcggaagctgctcgacgaggcggacacggaacgcgtcaag
ctcgagctcaatatcaaacgcttgcgggatgataacggagatctcaagagcaaattggag
aagaaaacaaaggatttgcagatagcagagcgaaatgcaataatacatgaaaaacgcagt
gatttgcaatcgccggcgaaacttactgagaaagatcaagattcgaagaaggaaagtgat
cgatcgaaagcattgctcgacgctctgaaacaccaggagaaggagcgaatcgattttgca
aacgttatcatatcacgtgtcttgtgtatatcgtgggaaaaacctatagagggaagaata
tttctgccgcaaacggcagcatacacgcaaacacagagacttttggactttagcgatatt
atcaatcaggcattgatggagattttatgcatattctcgagagaggaagatcctttgaaa
gacatcacagtagacacatcatccgaccgtgaagacagtccgaatagccaagcgagtcct
ttgataagtcctgctgtggctccttcattttatcaattaccgactataccattattcata
ggcgacagctcatcacaaccgaaaagttttacttatttattagattgttattcaagaatt
gcaattgaagaaagaaatcatgaagagcaatccagtgtacctcctctttccgatgtactg
acaattttgagagcgcaatgtgttcagtattccagtcttgttctacaagggttgatcggc
atttgccaagctgctgttatacctaagtgcaccattcatcttctctatccgatattatcg
caaaacttacctcggggctatctttgcgagctcgtggttaggacacacacgaatccgaac
acattcaataaaattttcactccagtcttgcaaggtctgtatctcgcgatgcagcagacg
agcttgagcttggacgacaatatgcatagaccgatcgaggcgctaggcgaactgatagag
attcgctgtggaccaagcggcaatatacgtccgatttgccgtctgataacgaatcaagtt
caattcttgcctgacgtgacatctgcagccggtagagagctcataaagacctcgtttctg
ggaccgtttctctcgctatcggtatttgccgaagaacaaccgaaaatgatggaattcttt
agcggagattatcagatagatgtagcgaaagagttcttcctgcagtaccagttggagatt
accagacagtcgttgcacaagatatttgatgcgatactcgcgaatagcaactgccgcgat
gccactcttgcatacttggcagcgttgctacgtcacaacgagaaacgcgcgcaaatacag
acggaggaggacagttcgttcttggccggagatggatttatgttgaatctactatcgatt
ttgcaaatgctctctgtgaagatcaaactggacactgtagacccgctgtatccatttcat
ccttccagcttcgtcgagataaaaaacgatacaagactgaaactcacttcgcaagaaatt
gcagaatggcagcaatatttggagagtacacataagtagacagaaccgaacttttcgaca
caatgttggttcctcacgctgcattatcatcacattgcgctgttaccggcattgcaaaac
tatcggagaaaactgtcggccttaaaggatttacaaaaaatgctctgcgaactgcaagtc
acagaaccccaatggagagatagtcctatagcagagcacaataaagacttgatcaaagaa
tggaagcaacagttgaagcgattggttaaatccacatcatgtacgacaacaggtgtgaat
cattgcatccttttgaaaagatgcttacacttttatatatcggtcgccgagtttctgctg
agtcttctaacgcagactgcttcgagtaatcctcttcctgaacttccgttgcttcaagaa
attacgtgcaaattcaccgcattaccggaatggtatatggaagacatagtggaattcttg
ttattcacattcaaatactacaagctttctcaagtaaactggaatgaagtggataaatcg
ccgcttatcactttgttactcgtcgttgtgtgtacgccacattgtatacgaaatccgcat
ctaatcgcaaaaatcatcaagcttctttataatatatatttgttatataaggatcaggtt
acgttgaaatcagcttataaattgaaaatggaaaacacttttggccataaagtcatggca
catcctatatccaagacatttctggcgttgtctctcatgaaattttgtaccgacgttgaa
ctcattgacactaattccgaatttgaggacaagtttacaatacgttatcacataagtgtg
atcttaaattggatgtgggataatccgatgcatcgagcgtctatcgtcaatgagagtaat
aacggcaagcacttcgtcaagtttatcaacatattgatgaatgatactacttttctgctg
gaggaggctctggaatatctgaactatatacttgagatggaggaatttatgtccgacact
atcgcatggaatgctgtttcgcacgaggaacaacaatcgagcacgagacagctggtggcg
gacgaggaaaaagtcagattttctcttaaattagtcaaggaaatagttgctatgtttcat
tatttaacggtcgacattaagaaaccatttctacgaccagaattagtcggacgattgtgt
gccatgctgaattctaatttgcaacagttgtgcggacctaagtatgaaaatttgagagag
agaaaactggaaaaatacggatggcaaccaaggactttactcagtcagttggttgatata
tatttacatcttgactgtgatgattttgtggctgctttagccagtgatgaacatttgttt
tgtaacgagttattcaccgacgctgcgaataaactagaaagatccgccattaaaactacg
acggaaattgataggttcgtagctctcgctgagcgtgcggcagtaatcgcaagagacaat
cgtgcgcgtggcgacgctcctgaagaatttcgggatccattgatggacactcttatggag
gatccagtcaagctaccgtctggtattgttatggacaaagcagttatcattagacattta
ctcaacagtgccacggatcctttcaatcggcagccgcttagcgaagatatgctcacgcca
agtaagtacatgtactgttcatatttttttcttttttga
DBGET
integrated database retrieval system
