Formica exsecta (narrow-headed ant): 115235056
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Entry
115235056 CDS
T07422
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115235056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115235056
Spliceosome [BR:
fex03041
]
Complex A
Other components
Complex A specific factors
115235056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
AP3D1
zf-CCHC_5
Toxin_SdpC
FAM199X
Motif
Other DBs
NCBI-GeneID:
115235056
NCBI-ProteinID:
XP_029662451
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MNQPRNFTSLLNPSYLQNAQQQQSTAGTNTATAAAAAAAAAAAAAAVSAAIANGTQANAN
SSSVTNRKREAEGDCKQEKETKEGERKKRKKTRWSGSEHDKTFIPGMPTVLPTNLTPEQE
RAYLFQLQIEEXXXXLRTGDLGIPLNPEERSPSPEPIYSSDGKRLNTREYRTRRKLEEER
HNLIQKILKINPEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLLIGPRGNTLKSMEK
ETGAKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVKKAVERIHEIIRQG
VEVPEGQNDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCPDKPNVTNNIVCSS
CGGAGHIARDCRSKRPGQGGPTAAGIGGMSQAGDKAKIDEEYMSLMAELGEGPPPDRSKT
GQARQNPNPNYPGLFDRQQPPRALMAAPAHPPPQMMQGGPMMPPPGMAPPPPWSQGGEGM
NNMNMQWQPPVSMPPPPGVMQPPPPPPGSTTQPNIPPLMPWMAGNNQPPPPGQMPPTQIP
PPGMGIPPWQQGQQGPMRPPPPGTAPPPGFPGGWQPQQMGGWPPAAPVPPPPQQQTPAPP
GIDLNTLPTLLAQPPPPPPPTS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaccgcgaaattttacgtcactgttgaatccgagctatctgcagaacgcccag
cagcagcaaagcaccgcgggtacgaacacggcgacggccgcagctgcggccgcggcggcg
gcggcggcagccgctgctgtttccgccgcgatagcgaacggcacgcaagcaaacgccaac
tcgtccagcgttacaaatcgcaagcgagaggcggagggagattgtaaacaggagaaagaa
acaaaagagggagaacgtaagaagaggaaaaagactagatggagtggtagcgaacatgac
aaaacatttataccagggatgcctacggtactaccaacaaatctgactcctgaacaggag
agagcttatctctttcagctgcagattgaggaannnnnnnnnnnactacgcaccggagat
cttggaattccacttaatcccgaggaaagatcgccatctccagagcctatttacagtagt
gacggtaaacggttgaacacgagagaatatcgcacgagacgtaaattggaagaagagcgt
cataatttgattcaaaaaatcctcaaaatcaatccagagtttaaaccaccaccagattat
aagccaccaataatacgagttcatgataaagtaatgattcctcaggaagagcatcctgat
ataaattttgttggcttacttattggaccacgcggaaatacgctaaaatctatggaaaaa
gaaacaggcgcaaaaatcataattcgcggaaaagggtctgtaaaggaaggaaaggttggc
agaaaggatggacaacctttaccaggcgaggatgaacctttgcatgcatatattactgca
aacaatttagatgccgtgaaaaaggctgtggaaaggatacacgagattattcgacaaggt
gtcgaggtgccagagggccaaaatgatttacgacgtaatcaattgcgcgagttggcttta
ctgaacggaactttacgcgagaatgatggaccacgttgtaccaattgtggagcttcggat
cataaatcttggctgtgtccggataaaccaaatgtaacgaacaatatagtatgctcgagt
tgcggtggtgcgggacacattgctcgagattgtagatcgaagagacctggtcaaggaggt
ccgactgccgccggaataggaggaatgagtcaggccggagataaagccaagatagacgag
gaatacatgtcgctaatggcagaattgggagaaggcccaccaccggacagatcaaagaca
ggtcaagccagacagaatcctaatcccaattatcctggactttttgacagacaacagcca
cctcgcgcgctaatggctgccccagcacatccaccgccgcagatgatgcagggcggtccg
atgatgccaccaccgggtatggcgccgcccccaccatggagccaaggtggcgaagggatg
aataacatgaacatgcaatggcagccgccggtgagtatgccaccgccaccaggtgtgatg
caaccgcctccgccaccgcctggttctaccacgcagcccaacattccaccattaatgccg
tggatggccggcaacaatcagccaccgccgccgggccagatgccacccacgcagattccg
ccacccgggatgggcataccgccgtggcagcagggtcaacagggaccgatgcgaccgcca
ccgccaggcacggcgccgcctccgggattcccaggcggatggcagccacaacagatgggt
ggctggccgccagccgccccagtcccacccccgcctcaacaacaaacaccagcaccgccc
ggaattgacctgaacacgctgccgacgttgctggcgcagccgccaccgccacctccgccc
accagttag
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