Formica exsecta (narrow-headed ant): 115235274
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Entry
115235274 CDS
T07422
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115235274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115235274
04121 Ubiquitin system [BR:
fex04121
]
115235274
03036 Chromosome and associated proteins [BR:
fex03036
]
115235274
03400 DNA repair and recombination proteins [BR:
fex03400
]
115235274
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
115235274
Ubiquitin system [BR:
fex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115235274
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115235274
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
115235274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
zf-RING_5
BRCT
zf-C3HC4
zf-RING_6
zf-C3HC4_3
zf-C3HC4_2
DUF2039
TRAF3_RING
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
115235274
NCBI-ProteinID:
XP_029662797
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MDISWTNTAKALQDFASILVCGKCGSKPISPVRLTNCGHFFCHNCIKSETICVKCDIPLQ
PCEINPDCLVSTLIQGCDTIAQIIKRKNIWDNIVDVSNISLDNTVSEILSTPRKHSYIRK
NINKPNSKGETQLHITCLKRNAEQVKHLLIAGANPNTKDNAGWTPLQEIVNYGYTEICKL
LLSCGALPNISGYNNKTPLHEAAEFDRIEEAKLLLDHHADKNLRDQYGKKPIDYCKSEKM
RQLLMNVQSSSEKILDKSINQTLNTSLYVRCDKFVIYASNLKHENQKLLGLIATKHKFKI
LTTYRSSVTHVIVEVNERNITKLTLDILFTIVHGSWLLNSDWIRLAEDMDDISNMDFELF
EVNGAPTSDIPKRARQNAENQNPRLFNNCSFYFALQTDTTYQIGDVELRKDDLIRLVKAG
DGTVLTREPNPEDLKDMMQVIPFHIANNLSHPLYKCTHYIIYMPGKGEPRIKYKMPHIKS
LPLIWLIECIEKFTLVNPAHLGLS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcgtggacaaataccgctaaagcgttacaagattttgcaagtatcctggtt
tgtggaaaatgtggctctaaaccaatatctcctgtaagactcacaaattgtggacatttc
ttttgtcataattgtatcaagtctgagacaatatgtgttaaatgtgatatacctctacag
ccgtgcgaaattaatcctgattgcttagtatcaactcttattcagggatgcgatactatt
gcacaaattattaaaaggaaaaatatatgggacaatattgtggatgtatctaatatatca
ttagacaatacagtgtctgaaatattaagtacaccaagaaaacattcttatattaggaag
aatataaataaaccaaactcaaaaggagaaacacaattgcatattacatgtttaaagaga
aatgctgaacaagttaaacatttgttaatagctggtgcaaatcctaacacaaaagataat
gcaggttggacaccattgcaagagatagtcaattatggatatactgaaatatgtaaatta
ctactaagttgtggagcattgcctaatatatcaggttataataacaaaactccactgcat
gaagctgctgaatttgatagaattgaagaagctaaattattattggatcatcatgctgat
aagaacttacgtgatcaatatggcaaaaaacctatagactattgtaaatcagagaagatg
cgacaacttttgatgaatgtacagtcctcgtctgaaaagatattggacaaaagtattaat
caaacactaaatacatcattatatgtaagatgtgataaatttgtgatttatgcctcaaat
ttaaaacatgaaaatcagaaattgcttggtctcatagccacaaaacataagttcaagatt
ttgactacatatagatcatctgttacacatgtcatagtggaagtaaatgaacggaacatt
acaaaattgacattagatatcttatttacaattgtccatggcagctggcttcttaatagt
gattggattagactggcagaagatatggatgacatatctaatatggattttgaattgttt
gaagttaatggcgcaccaacttctgatatcccaaaaagagcaagacaaaacgcggaaaat
caaaatccacgcctattcaacaactgttccttttattttgctttacaaacagatacaact
tatcagattggcgatgtagaattaagaaaagatgatttgatacgacttgtgaaagcagga
gacggaacagttcttactagagaaccaaatccagaggatctgaaggatatgatgcaagtg
ataccttttcacattgcgaataatttgtctcatcctttgtataaatgtacacattatatt
atatatatgccaggcaaaggcgaaccacgtattaaatacaaaatgccgcatatcaagagt
ttgccacttatatggctgattgaatgtatagagaaatttactttggtcaatccagctcac
ttgggattatcctaa
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