Formica exsecta (narrow-headed ant): 115235343
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Entry
115235343 CDS
T07422
Name
(RefSeq) retinal-specific ATP-binding cassette transporter-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115235343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fex02000
]
115235343
Transporters [BR:
fex02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115235343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
SMC_N
R1_ABCA1
AAA_23
AAA_29
RsgA_GTPase
AAA_15
AAA_30
AAA_13
Motif
Other DBs
NCBI-GeneID:
115235343
NCBI-ProteinID:
XP_029662907
LinkDB
All DBs
Position
Unknown
AA seq
1667 aa
AA seq
DB search
MASGWKIFGLLLYKDLIVRKRHWRTILFLQAFLPIGLFALLQAVRDFSAQTPIKINESTF
YSIQTQNDLMEKLDNDLNNIYYLPRSTYTDKIMESARNCLGLVSESMKGFSNETEMIDAY
IVSQAQNPILSVVAIVFEQYNKSTIKYKIRHSWNIPYDLYQTVLGEHMRASPIMYFDMVP
IVQVQMCVDEALINQAAANSMSNIKMSIQRMPYPPHIKIDTADVILREVICTFAVIAFVI
PLCIEANYASKEKFIGINVLMAMNGVKLSYNLLSWLITGILFSILYVVPIIILFKNTFST
NVEAYLQYGNVFIFWLVFTAHIGHLITFGMHIAAYFSKPRFVTTALAIIYTAALSLHEHM
AREEDFGLISYFGIIFPNILLYRFLQETNAHESKLIGIQWNNIFVPGNEEYGIVGSMGFI
FLFSVLGAVIHFTLAVYINAIFPGKYGVRKSPLYFLKCIKKNKISLDEEVIEFDYDKIAN
EDFEPVLGGALTPGIQIRDLKKSYVTCWLRKSKVHALKGISVDFYKGQITALLGHNGAGK
TTLMSILTGVTSETEGKVFINGKNIRRHLHSIRKDLGLCPQENMVFPDLNVFEQIEFFGL
LKAKNKTRKEVRQDVYTLLAKLKLSEKKDFLPSKLSGGQQRRLCLGMALIGDAGIIILDE
PTSGMDPETRRDTWDIILKLRGEKTILISTHNMEEADILGDRIAIVHSGRLRSYGTAMFL
KKQYGHGHIEVTLSTKSWCVPEKVISKFDLRTQQLCVDTEKIVLNVPYTDSLPQSLDKVE
SEKKKLGVTGISVSLITLEQVFLKIVKKEDNGRHLNELFTAPLGKVTGTMLCMQSILALL
AKKFTYTRKNITTLLMIIIFPILSVLLMALSYNLPNDSTDIVPLNLGMYRYPKVLYSSHD
NIIGQKYGDVARYFGQAERVADTSITNALLIFSMADIAEYRNNLIVSAEFNATENSTILA
NGFYSGIALHSVPLTVNLLSNTFIKTFASDQHSILISRQQLPNTLVSSKLEAPEAESLSR
VLIFCSFFFPTVALFVVHPLQETITKVKQLQRMTGVTSLSYWGTMFVFDLLLYTVCILLI
TLAFYIMDIILDLRLYYRTEILCTILILQLFGINVLFIVYIFSFMNKSRSTIITILGLAP
LGLAVIQYLLHQVIHNFDWLNPLHIIQKSIFHLIPYISLFHGQLSFFNIAVQNARCRRLP
NRLQDIVCLIPGDFCCGLDCADGVCKKQLPYFKDFKDDINFEESIIYLSITPILYFAILI
MIEEKIFLKLYAKIGTKPKSELENMDDQVKKEKLAVALEINKINSQNVNVTKQEFKTDTT
DANNSELIQSPVSEDNSLFLVYELNKYYGTLVAVNEISFRVKPRECFGLLGVNGAGKSTT
FRMLTGEEIPDSGIMYLGRAEIFKNRKKYLSEMGYCPQTDALMPSLNAFDHLRLFARLRG
IPKSNVELEVNKWINRLNLTACMMQPSGTYSGGNKRRLNIAMALIGNPTLVLLDEPTTGV
DPAARRSLWNTLQACQAAGQAIILTSHSMEECEALCNRLVIMVKGELVCVGPSQELKQRF
GAGYDIHIKLNPGRSDEDVENIKMIIESTLTCDIRDDNLGLLAYHVTDCNTTWEKMYDTM
KNLKQRYSCIEDYAVLSATLEQLFIQFARGVEMPKRSSTYITSHEEV
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggccagtggctggaaaatttttggcttgttgctatacaaggacttgatagtacgcaag
agacattggcgtacaatattattcttacaagcttttctgcctattggattatttgcatta
ttacaagctgtgagagattttagtgctcaaacaccaattaaaataaatgaaagcacgttt
tattctatacaaacgcaaaatgatttaatggaaaaacttgataacgatttaaataatatt
tattatctgccaagaagtacatatacagataagattatggagtctgccagaaattgtctc
ggacttgtatctgaaagtatgaaaggtttctctaatgagactgaaatgatagatgcttat
atagtttctcaagcgcaaaatccaatactttctgtggtagccattgtttttgagcaatat
aataaaagtactataaagtacaaaattagacattcctggaatattccatacgatttatac
caaactgtattaggtgaacatatgagagcatcacctataatgtactttgatatggttcca
attgtgcaagttcagatgtgtgtagatgaagcacttataaatcaagcagcagcaaattct
atgtcaaacataaagatgtcaatacaaagaatgccttatccaccacacatcaaaatagac
acagctgatgtaatactacgtgaagtaatttgtacatttgcagttatagcttttgtaatt
ccactttgcatagaagccaattatgcgtcaaaagaaaaatttattggtataaatgtttta
atggcaatgaatggagtcaaattatcctacaatttattaagctggttaattacaggaata
ttattcagtattctttatgtagtgccaataatcatattatttaaaaatactttttctaca
aatgttgaagcctacttgcaatatggaaatgtatttatattttggctcgtatttacggca
cacattggacatcttataacatttggcatgcacattgcagcttacttttcaaaaccacgt
tttgtgacaactgctttagctattatatatacggcagcattgtcgcttcatgaacatatg
gcaagggaagaagattttggacttatatcatattttggtataatatttccaaatattctg
ctgtatagatttcttcaagaaacaaatgcacatgaaagcaaattaattggtattcaatgg
aataatattttcgttcctggaaacgaggaatatggcattgtaggaagtatgggcttcata
tttctcttctcagtcttgggcgctgtgatacattttacacttgcggtttatataaatgct
atatttcccggtaaatacggagttcgaaaaagtccattatattttttgaagtgtatcaaa
aagaataaaatatccctagatgaagaagttattgagttcgattatgataagatagctaat
gaagattttgaaccagtattaggtggtgcacttacacctggaatacaaatacgtgatctt
aaaaaatcttatgtaacatgttggctacgaaaatctaaagttcatgcactgaaaggaatt
tctgtggacttttacaaaggacaaattactgctctgcttggacataatggagcaggcaaa
accacacttatgtctatattaacaggtgtgacaagtgagacagaaggaaaagtatttata
aatggcaaaaatataagaagacatctacacagtattagaaaggatttaggtttatgtcct
caagaaaacatggtttttccagatttaaatgtatttgaacaaatagaattttttggtttg
ttgaaagctaagaataagaccaggaaggaagttaggcaagatgtttatactttacttgct
aagctgaagctttctgaaaaaaaagattttcttcctagcaaattgtccggcggtcaacag
agaagattgtgtcttggaatggcactcattggtgatgctggcattataattttggatgaa
ccgacatctggaatggatcctgaaactagacgagacacatgggacattatattaaaactt
agaggagagaaaacaatattgattagtacacataatatggaagaggctgatatacttggt
gatagaatcgcgatagtacattcaggtcgtcttagaagttatggcactgcaatgtttttg
aaaaaacaatatggtcatggtcatatagaagttactttatcaacaaagtcttggtgcgtt
cctgaaaaagtaataagtaaatttgatttgaggacccaacaactttgcgttgatactgaa
aagattgttttaaatgtgccatatacagattctttgccacaatcactagataaagtagaa
agtgaaaagaaaaaattaggggttactggaataagcgtgtcattgattactttagaacaa
gtttttctaaaaattgtgaagaaagaagataatggaagacatcttaatgaattatttaca
gcgccattaggcaaagttacagggactatgctatgtatgcaatcaatactggcattactt
gccaagaaattcacatatacaaggaagaatataactactttattgatgattataattttt
cctatcttgtcggtgcttttaatggctttaagttacaatttaccaaacgattccacagat
attgttccattaaatcttggcatgtacagatatccgaaagttttatattcgtcacacgat
aacataattggtcaaaaatacggagatgttgctcggtatttcggccaagcagaacgcgta
gcggatacaagtattacaaatgctcttctgattttttctatggcggatatcgcggaatat
cgtaacaatcttatcgtatctgccgaatttaatgccactgaaaatagcacgatattggct
aacggtttttattctggcatagcactccatagtgtgccattaacagtgaatcttttgagt
aatacattcatcaagacttttgctagtgatcaacactcgattcttatatccaggcaacaa
ttaccgaatacacttgtttcgagtaaactagaagcgccagaagcagagtcgctctcacgc
gtattaatattctgttcgtttttctttcccactgtggcgttgttcgttgtgcatcctctg
caggaaacaattacgaaagttaaacaacttcaacgtatgactggtgtcacatcgctatca
tactggggtacaatgtttgtttttgatcttctattgtatacagtgtgcatactgctgatt
accttggcattctacattatggatattatccttgatcttcgtctatattatagaacagag
atattatgtacgatattgatcctgcaattgtttggtattaatgttttatttatcgtctac
atattcagttttatgaataaatcaagaagtacaataataaccattttgggtcttgcacct
cttggtcttgctgtaatacagtatctcttacatcaagtaatacacaattttgactggctt
aacccgctacacattatacagaagagcatcttccatctaattccttatataagtttattc
catggtcagctatcctttttcaacatagctgtacaaaatgcaagatgtcgtcgtctacca
aatagacttcaggatatagtttgtcttatacccggcgatttttgttgtggtttggattgt
gctgatggagtttgcaaaaaacaactgccttattttaaagactttaaggatgatataaat
ttcgaagaaagtataatatatttatctataacaccaattttgtattttgctatattgatt
atgatagaggaaaaaatatttttgaaattatatgcgaagattggcacaaagccaaaaagt
gaattagaaaacatggacgatcaagtgaagaaagagaaacttgctgtagcattagaaatt
aataaaattaacagtcaaaatgtaaatgttacgaaacaagaattcaaaacagatactaca
gatgctaataattccgaattaatacaaagtccagtaagcgaagataatagccttttttta
gtgtacgaattaaacaaatattatggaacactagtggctgtgaatgagataagttttcga
gtgaaaccgcgggaatgtttcggattgcttggcgtaaatggtgctgggaagagtacaact
ttccgaatgctaactggggaagaaattcctgacagcggcataatgtacttaggccgagcg
gaaatttttaagaataggaagaagtatctttctgaaatgggatattgtccacaaaccgat
gctttaatgccatccttgaacgctttcgaccatttacgattgttcgctcgccttcgcggc
ataccaaagtccaatgtggaattggaagttaacaaatggattaatagactgaatttaact
gcttgcatgatgcagccaagcggtacttacagtggtgggaacaagagacgcttaaacatt
gcgatggctctaattggtaatcctactcttgttctcctagacgaacctacaactggtgtt
gatcctgcagctagaagatcgctatggaatactttgcaagcatgccaagcagcaggacaa
gccattatacttacatctcatagcatggaagaatgtgaagcactttgcaatcgactagtc
attatggtgaaaggtgaattggtctgtgttggtccaagtcaggaattgaaacaacgattt
ggggcgggctatgatattcatataaaattaaatcctggccgatcagacgaggatgttgaa
aatattaagatgatcattgaatctactttaacatgcgacataagagacgataatttgggt
cttctcgcctaccatgtaactgattgtaacacaacgtgggaaaaaatgtatgatacaatg
aaaaaccttaagcaaagatatagctgcattgaggattatgctgttttatctgcaacttta
gagcaactctttattcagtttgcaagaggtgttgaaatgcctaaaaggtcttcaacttac
attactagtcatgaagaagtctaa
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integrated database retrieval system
