Formica exsecta (narrow-headed ant): 115235870
Help
Entry
115235870 CDS
T07422
Name
(RefSeq) collagen alpha-2(IX) chain-like isoform X1
KO
K08131
collagen type IX alpha
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex04512
ECM-receptor interaction
fex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115235870
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115235870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fex00535
]
115235870
Proteoglycans [BR:
fex00535
]
Extracellular matrix (ECM) proteoglycans
Others
115235870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
115235870
NCBI-ProteinID:
XP_029663813
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MYLQIWIFMVAHIIYAQHVVRESIIKRGLCNGYKLGEDDLQTFDFISKLQLDLLNARYSG
MTKVRGSNRIQTAYRLEKDTDVTLPTKDIIPTGLPEEFSLVYTLRARKSPKYAWHIIKIV
DARGDAQFLITMSPRKQTLDFSLIDHEGKLQTVSFPNDRIFDKGWHKINFGVFKDKLVLK
VDCEHIGTEELRPRRSSKVDGDMSIAKMKNSKVTVPIDIQWMSLNCDPTRLERETCEELP
KNLAASLQMKPACEKICLQGFNSTNGSPDLRGPPGVPGPIGIPGQRGLPGEQGRTGAPGN
TGARGFPGLQGPKGSIGPAGSPGLPGLPGQKGDRGERGDMGFPGLKGDQGPRGFPGPPGN
SNSSRLMGPPGEKGAKGERGNDGAQGQPSEKGERGDRGLDGIRGHDGTPGPPGPPGLPGS
PGPAGNIVFTDAPGIPGPTGPRGVTGLPGPLGPPGLPGLSGPPGPPGQRGPKGDTGERGR
DGIPGLTNNNVIPGSPGPEGRAGPPGEDGLPGEKGEVGPIGPPGLPGEIGKDGIPGLPGP
QGPPGLRGEPGSPGSRGLEGVAGKSGPPGLDGKPGQKGKEGEQGPVGPRGLPGSSGSTGL
PGTPGVPGLEGRPGLSGPPGPPGPPGSLGPPGSPGFPTSNSNFDRIDNLDLEGPRGPIGS
PGIPGERGAPGERGSEGQIGPPGIPGKDGAPGLQGLPGNRGQTGLPGLQGLPGHNINEAE
IRDICASVLREQMTEMAALMQGPPGPPGRSRPGRLGSPGPQGRPGDPGSPGLPGERGFVG
LPGPQGLIGPQGPPGERGEKGDRGLEGIGSEGPPGPIGPPGSPGNDGVGLPGRQGDKGER
GRPGVPGVVGAPGAQGPPGFCEFCNYPSSNYLQYNRGNEKGP
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcaaatatggatatttatggtagcgcacataatctatgcccaacacgttgtg
agagaaagcattatcaaacgtggtctatgcaacggttacaagctcggcgaagacgatcta
cagaccttcgacttcatcagcaagttgcaattggatctgttgaatgcgcgttacagcggc
atgacgaaagtgcgaggcagcaatcgcatacagacggcatatcggctagagaaagacact
gacgtcacccttccaacaaaggatattatacctactggacttccagaggaattctcgttg
gtgtacacgttgagagctagaaagtcaccaaaatatgcttggcatatcattaaaatcgtg
gacgcgagaggtgacgctcaatttctcatcacgatgagtcccaggaaacagacgctagat
ttttcattgattgatcacgaaggaaaattgcagacggtctctttcccgaatgatcgcata
ttcgacaagggttggcacaaaataaatttcggagtgttcaaggataaattagtgcttaaa
gttgattgcgaacatattggtacagaagaattaagaccgcgcagatcaagtaaagtcgat
ggagacatgtcgatagccaaaatgaagaatagtaaagtcactgtaccgatcgacatacaa
tggatgagcctaaactgcgatcctacgagactagagagagaaacgtgcgaggagctacca
aaaaacttagccgcctcgcttcaaatgaaacctgcttgcgaaaaaatctgcctgcaagga
ttcaacagtacaaatggatcccccgatttacgcggcccgcccggagtaccgggaccaatt
ggtatacccgggcaacgtgggctgccgggagaacaaggaagaacaggagcccctggtaat
actggcgccagaggtttcccaggattacagggtcccaaaggatcgatcggacctgcggga
tcaccgggattaccaggtttaccgggacaaaaaggtgatcgtggtgaaagaggtgatatg
ggatttccgggtttgaaaggagatcaaggtcctcgaggatttccgggcccaccagggaat
agcaactcgtcacgcttgatgggtccccctggcgagaaaggagctaaaggtgaacgggga
aacgatggtgctcaaggacaaccgagtgaaaaaggcgaacgtggagacaggggattagac
ggaattcgcggtcatgacggcacaccaggtcctcccggtcctccgggacttcccggttcc
cctggacccgcaggaaatatcgtatttacggatgctcctggtattccaggaccaacaggt
cctcgtggcgtaacaggtctgccggggccactaggtcctccaggattgccaggattatca
gggcctcctggaccgccaggccaaagaggtccgaagggtgataccggagaacgtggtcga
gatggcataccgggactgacgaataataacgtaatacctgggtcacctggtcctgaagga
cgtgctggtcctcctggcgaagatggtcttcccggtgagaaaggagaagttggaccaata
ggtcctccaggattacccggagaaataggaaaagatggaattccaggattaccgggaccg
cagggaccaccaggcttacgcggggaaccgggctctccaggatcgcgaggtttagaaggg
gttgcaggaaaatcagggccgccaggactcgatggaaaaccaggtcaaaaaggcaaagaa
ggtgaacaaggacctgtcggacctcgtgggctaccaggaagttcgggttcaacgggcctg
ccgggtacaccaggcgtaccaggattggaaggaaggcccggtctatccgggccaccagga
ccgccaggaccgccaggttcgctagggcctccaggatctcctggttttccaacttcaaac
agtaacttcgataggattgataatctcgatcttgaaggacccagaggcccaataggctct
ccaggaataccaggtgaaagaggagcccctggagaacgaggatcagagggtcaaatagga
ccgcccggaatacccggcaaggacggagcacctggattgcaaggattacccggaaataga
ggtcaaacgggattaccaggacttcagggcctgccgggccacaatatcaacgaagcggaa
attcgtgatatttgcgccagcgtgttaagagaacagatgaccgaaatggcagcactcatg
caaggcccacccggtccgcccggtcgaagtcgtccgggccgtcttggatcgcctggtccc
caaggtcgtccaggtgatccgggctcaccaggtttgccgggagaacgtggattcgtcggt
ttaccgggtccgcaaggtctcatcggaccacaggggccaccaggagaacgcggagaaaaa
ggggacagaggtctcgagggaatcggttcagaaggtccacctggtccaataggtccccct
ggatctcctggtaacgatggtgttggtttacctggaagacagggtgataaaggcgagcga
ggcagaccaggtgttcccggtgttgtcggagcgccaggagcgcaaggaccaccaggattt
tgcgaattttgtaattatcctagcagtaattacctgcagtacaatcgtggtaatgaaaaa
ggtccttga
DBGET
integrated database retrieval system
