Formica exsecta (narrow-headed ant): 115236011
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Entry
115236011 CDS
T07422
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fex03021
]
115236011
03036 Chromosome and associated proteins [BR:
fex03036
]
115236011
Transcription machinery [BR:
fex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115236011
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
115236011
SLIK complex
115236011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Tudor_4
Motif
Other DBs
NCBI-GeneID:
115236011
NCBI-ProteinID:
XP_029664051
LinkDB
All DBs
Position
Unknown
AA seq
1806 aa
AA seq
DB search
MQKTLESESGKESGSDSENDSKSDSSSSGSNSGSGSGSDSDSSSSSGSGSGSGSDSGKSE
KSDAPAAQSDSFQSKSSNHSTETKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRLATN
RDSDSDGRKKFKKKGSHNSWNSESSDSESDEIENRRPPPSKSLNRRAAQKAKEKARVRKK
RISESSENSSFDSDDNRRQVTRRTGTAVSYKEESEEGTDSEDLVEVDESNAASAEPDNAE
TIEQILGQRVGKKGVTGNVTTIYAVEENGDPNPEDLSNVETEVQYWIKWKGWSHIHNTWE
SEESLKAQKVKGLKKLDNFIKRERRMEQMREYAEPEELEYFECQLELKHDLLKSYNNVER
IIAEYKKPDSEHPDYFCKWDNLPYADATWEDGALIVKKWPEKIKEFRDREDSKRTPSKHC
KVLKSRPKFYQLNEQPSYMGKEKDLVLRDYQMDGVNWMIHSWCKENSVILADEMGLGKTI
QTICFLYYLFHTQQLHGPFLLVVPLSTMTSWQREMTQWAPDLNFVVYLGDVNSRNVIREY
EWCYRGSKRLKFNVILTTYEIVLKDKALLGALNWAVLLVDEAHRLKNDDSLLYKALSEFH
TNHRLLITGTPLQNSLKELWALLHFIMPTKFVTWEEFEKQHDNAAQKGYSKLHKQLEPFI
LRRVKKDVEKSLPAKVEQILRVEMTSLQRQYYKWILTKNYEALRKGMKGSSSTFLNIVIE
LKKCCNHAFLTKPIEAEREKSSNEDYLQTLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQM
VKMLDILSEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINL
ATADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMVLD
HLVIQRMDTTGRTVLDKKNAGTNNNPFTKEDLTAILKFGAEDLFKDEEDGDEEPSCDIDE
ILRRAETRDEAPTTVGDELLSAFKVASFKPTFEEDLEPINQPNDNDDESKDWAEIIPENF
RKKVEEEEKSKEMEDLYLPPRSRKTLQQINQGEGRGRKRKKVQDDSEEGEESGSEAEGSD
DERPKKRGRPRVLPREYIKSFTDVEIRRFVKSYKKFPAPLKRLDDIATDADLQEKPMSEL
RFLGEQLKSRCDMCLIEFENTAKENKTGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFSAA
VKELEPLEQALPSDPEQRANWHLDIKSKPANFDCEWTSEDDSRLLRGIYQHGMGSWEAIK
MDASLELGDKIFPNGSKVQLKRVNARAEYLLKILKKQIDLKLGVTRMRKPRKPKEMKTAI
TKEIVEDNDTSGDETKKSKSKNDKSGVKKEEDIVAKKEVKDEIDDLSDDKKKDKKIKKEK
KENKKAKKNKQAAGPMHFTANNEPRAVDVIGELDPPIFDECKEKMRPVKKALKALDTPDM
SLSEEERVARARRCLYQIGNHINTCLTEYRNPEQISEWKSNLWYFASKFTNFKAKKLYRM
YKNLVKQGGDSNGGTTSSPDKKEDVSNTTKKHNERSSHDKQQADSGSANKDSRITKRKID
DTEENSNSSIQSKKQNISAVSSSITSTSTVTIGAITITPITSTPNSTSSTTNSAETSRHK
EQKESKHKDMKRDRERDRDRDRGHNDRGMDRISGGKDDRIRRDSGGYNMGHYSGSREDDH
WLSRDGRDMRDGRYGFGDHKRDRFDMYGRMSGGYHRDRDRDRDRGMHMNEKRSDYYRYSS
GPPNYGYNPGSYGGSSGSGGYPPTDIAPGHFRGRGYLGDSYSGDWRSNKDYRRDYDRRPP
PPNANS
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacattagaatccgaatctggtaaggaatccggatccgattcggagaatgat
agcaaaagcgatagctcctcttccggaagcaatagtggctcaggatcaggatctgacagt
gactctagttcctcgagcggttccggttccggatcaggttctgattcaggaaagtcagag
aagtcggatgcacctgctgcacaaagtgatagcttccagagcaaaagctcgaatcacagc
acagaaacaaagcttagagttaaacatgagtccagccgtgagtgggacgagaatcctgac
atatacggcattaggagatccgggcgttccaggaaggaacccgacaggctcgcgacgaat
cgcgatagcgacagcgatggtcgcaagaagtttaagaagaaaggttcacacaattcctgg
aattcagaaagttcagattccgaatctgacgaaattgaaaatcggaggccgcctcctagc
aagtccctgaacagacgcgcggcgcaaaaagcgaaagagaaagccagggtacgaaaaaag
cggatctctgaatcttctgaaaattcttcctttgatagtgatgacaatagaaggcaagtc
actagacggactggtacagcagttagttataaagaagaaagtgaagaaggtactgatagt
gaagatttggttgaagttgatgaatcgaatgctgcatcagccgaacctgataatgcggaa
actattgaacaaattttgggacagagagtgggcaagaaaggagttactggcaacgtgacg
acaatctatgctgtcgaagaaaatggcgatcccaatccagaggatctaagtaatgtagaa
actgaagtacaatattggataaaatggaaaggctggtctcacatacacaatacgtgggaa
tcggaggaatccttaaaagcacaaaaggtaaaaggcttgaaaaaattagacaattttatt
aaacgtgaacgcagaatggaacagatgagagaatacgcggaaccagaggaattggaatac
tttgaatgtcaattggaactcaagcatgatcttctgaaaagttacaataatgtcgagagg
attattgctgaatataagaaaccagattcggaacatcctgattatttctgtaaatgggac
aatctaccatatgctgacgctacatgggaagatggagctttgatagtgaaaaaatggcca
gagaagataaaggaatttcgcgacagggaggattccaaaagaacaccaagcaaacattgt
aaagttcttaaatctagacctaaattttatcaattgaacgaacagccatcttatatgggc
aaggaaaaagatttggtattaagggattatcaaatggatggagttaactggatgattcac
tcctggtgcaaggaaaacagtgttatattagccgatgagatgggtctcggcaaaacaatc
caaacaatatgcttcctttattatctttttcacactcaacaacttcacgggccattttta
ctagtagttcctctgtcaacgatgacttcctggcaaagagagatgactcaatgggcacct
gatttgaatttcgtcgtttatttgggtgatgtcaattcgcgtaatgttattagagaatat
gaatggtgctatcgaggatcgaagagactaaaattcaatgtcatacttacgacgtacgag
atagtacttaaagacaaagcactgttgggtgccttaaattgggcagtgctgctagtggat
gaagctcatcgattgaaaaacgacgattctcttctatacaaagcacttagcgagtttcac
accaatcatcgtttgttgatcactggtactccgttacagaatagcttgaaagagttatgg
gctctattacacttcattatgcctaccaaatttgtcacatgggaagaatttgagaaacaa
catgacaatgctgcgcaaaaaggatactccaaactacacaaacaattggagccatttatt
ctgcgtcgagttaagaaggatgttgaaaaatctctgcctgctaaagttgaacaaatttta
cgggtagagatgacgtctctgcagagacaatattataaatggatattgactaaaaattac
gaagcattaagaaaaggcatgaaaggatccagttcgacatttttgaatatcgtgattgaa
ttaaaaaaatgttgcaatcatgctttccttacaaaaccgatcgaagccgaaagggagaaa
agcagcaatgaggattatttgcaaacacttatccgtggttctgggaaactagtactttta
gataaattattagtgagattgcgtgatacgggacacagagtattaatcttcagccaaatg
gtcaagatgttagacattctcagtgaatatctgcaaaagaggcatttcccattccaaaga
ttagacggcagtataaaaggggaactgagaaaacaggcattagatcactttaatgctgaa
ggatcgcaagatttttgtttcctgttgtcgacgcgagctggcggtctcggtattaatctt
gccaccgcggatactgtgataattttcgattccgattggaatccgcaaaacgatttgcag
gcccaggctagagcacatcgaataggacaaaagaataaggtcaatatttatcgactggtt
accaaaaaatcggtcgaggaagaaattgtggaacgtgcgaagcagaaaatggtcttggac
catttagtgatacagcgaatggatacaaccggacggacagtattggataagaagaacgca
gggaccaataacaatccatttaccaaagaagatttaactgctattttgaaattcggcgcg
gaggatctgtttaaagatgaagaagacggagatgaggaaccatcttgcgatatcgatgaa
atactaagaagagccgaaacaagagacgaagctccaacgacggttggcgatgaattgtta
tccgcttttaaagttgccagttttaaacctacttttgaggaggatttggaacctattaat
cagccgaatgataacgatgatgaaagtaaagactgggctgaaatcattccggaaaacttt
cgaaaaaaagtagaagaagaggagaagtcgaaggaaatggaggatctttatttgccaccg
agaagtcgaaaaacacttcaacaaatcaatcagggcgaaggaagaggcagaaaacgcaaa
aaagtacaggatgatagcgaagagggcgaggagtcgggtagcgaggcagaaggtagtgat
gatgaaagacccaagaaaagaggtagaccgagagttttgccgcgcgagtacattaagagt
ttcacggatgttgagatacgaagattcgtcaaaagttataagaagtttccggcacctttg
aagcgattggatgatatcgcgactgatgctgatttacaagagaaaccaatgtcggaattg
cgcttcttgggcgaacaattgaaatctagatgcgacatgtgcttaatagagttcgagaac
acggcgaaggaaaataaaactggcgaagaagaaggcaaggggcccggccgtaagagagga
cggggacctactttcaagataggcggtgttatggtgaacgcgaagtcattctcggccgcg
gttaaagaactcgaacctttggaacaagctttgccatccgatcctgagcaacgcgccaat
tggcatctcgacattaaatcgaaaccagcaaactttgattgcgaatggacttccgaggat
gattcaagattattaaggggtatatatcaacacggtatgggttcgtgggaagcgataaaa
atggacgctagtttggaactgggggataagatttttcctaatggcagtaaagtgcaactt
aaacgtgtgaacgcacgtgcggaatatcttctgaagattttgaagaaacaaattgatctt
aagttaggagtgacacgaatgagaaaaccaaggaagcccaaggagatgaaaacagcaatc
actaaagaaattgtagaagataatgatacttctggtgatgaaactaagaaatcaaaatcc
aaaaatgataaatctggagttaagaaagaagaagatattgttgcaaagaaagaggtcaag
gatgaaattgatgatttatctgacgacaagaaaaaggataagaaaattaaaaaggagaag
aaagagaacaaaaaagcgaagaaaaataaacaagctgcaggtcctatgcattttactgcg
aataacgaaccgagggctgttgatgtaattggcgaattggatcctccgatatttgatgag
tgtaaagaaaagatgaggccggtgaagaaagcattaaaggctctagatacgccagatatg
tctctaagcgaggaggagcgagttgctcgtgcgcgtcgatgcctctatcaaattggaaac
catatcaatacatgtcttacggagtatagaaaccctgaacaaatcagcgagtggaaaagt
aatctttggtattttgcttcaaagttcacaaactttaaagcgaagaagctttatagaatg
tataagaacttggtgaagcaaggtggcgatagcaatggcggtactacctcgagtcctgat
aaaaaagaggatgtctccaatactacgaagaaacataatgaaaggtcgtctcacgataaa
caacaggcagacagcggtagcgctaacaaggacagcagaataacgaaacgtaaaattgat
gataccgaggagaactcaaatagcagtatacaaagtaagaaacagaatatttctgctgtc
agtagcagtatcaccagcacatccacagttactattggtgctattacgattactcctata
acatcaacaccaaattccacatcaagtaccactaacagtgcagaaacatcacgacataaa
gagcaaaaagagtcgaagcataaagatatgaaaagggatagggagcgtgacagagataga
gacagaggacacaatgacaggggtatggataggataagcggaggaaaggacgacagaatc
aggagagatagtggaggatacaatatggggcattatagtggcagcagggaggacgatcat
tggttatccagagatggaagagacatgagagacggcaggtacggattcggagatcacaaa
cgcgaccgcttcgatatgtatggccgaatgtccggcggttatcacagagacagggacagg
gatcgagatcgtggtatgcacatgaatgagaagaggagtgattattaccgatattcctcg
ggaccgccgaattatggatacaatccgggtagttatggtggtagcagcggcagcggtggt
tatcctccaacggatatcgcaccgggtcattttagaggtcgcgggtatctaggagatagt
tattccggtgattggcggtcgaacaaggattataggcgagattacgatagaaggccacca
ccaccaaatgccaactcctag
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integrated database retrieval system
