Formica exsecta (narrow-headed ant): 115236308
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Entry
115236308 CDS
T07422
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03013
Nucleocytoplasmic transport
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115236308
09122 Translation
03013 Nucleocytoplasmic transport
115236308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115236308
03041 Spliceosome [BR:
fex03041
]
115236308
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115236308
Spliceosome [BR:
fex03041
]
Complex C
Other components
EJC/TREX
115236308
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115236308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Tricorn_2nd
RMC1_N
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_EML
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
NBCH_WD40
DSE1_N
WDR90_beta-prop_4th
PAC11
Beta-prop_TEP1_C
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
TRM82_WD
Beta-prop_WDR75_1st
PD40
Beta-prop_EIPR1
PROPPIN
Beta-prop_Nup120_160
DPPIV_N
vWF_A
Motif
Other DBs
NCBI-GeneID:
115236308
NCBI-ProteinID:
XP_029664530
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MAATASRVEELIKYFKSHNKIREQQSHSAKVHSVGWSCDGKYLASGSFDKSVCIFSLCPD
RLKQETTFRGHGGSVDQLCWHAFYPELLSTASGDKTVRIWDTRTQKCTANISTRGENINI
SWSPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVH
ILSYPELELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLDW
PVRTISFSFDGQLLAAASEDLVIDIGEVETGEKIADVPVEAATFTVAWHPKQYLLAYACD
DKDTYDRKRDAGSLKVFGFAND
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccgcttcacgagtggaggagctgattaaatattttaaatcgcataacaaa
attcgggagcagcagagtcactcggcgaaggtgcacagcgtgggatggagctgcgatggc
aaatacctggcttcgggctccttcgacaagtccgtctgcatattttctttatgtcctgat
cgtttgaagcaggaaacaacttttagaggacatggcggtagcgtggatcaattgtgctgg
catgccttctacccagaattattatccacagcgagcggagataagacagttcgtatctgg
gatacaaggacgcagaaatgtacggcaaacatcagcacaaggggagagaatatcaacata
tcatggtcaccggacggtaacacgatcgcggttggaaataaggaggatctcgtgactttc
atcgatgcccgggtaatgaagatacgcgcggaggagcagttcaacttcgaggtaaacgag
atttcgtggaacaaggactcggacacattctatctgacgaacggccaaggttgcgtgcac
atacttagctatcccgaattggaattgttacacgtgatcaaggcgcatcccggtacctgt
atctgcatcgagtttgatccgactggccggtattttgccaccggatccgcggatgcgctg
gtgtccctatgggacgccgacgaattgtgttgcttgaggacgttttcgcgattggactgg
ccggtgcgcaccatctccttctcatttgacggacagctgctggcggcggcatccgaggat
ttagttatagatatcggtgaggtggagaccggcgagaagatcgccgatgtcccggtggag
gcagcgacattcactgtcgcgtggcacccaaaacagtatctcttagcttacgcgtgcgat
gataaggacacttacgatcgcaaacgcgacgccggaagcttaaaggtgttcggcttcgcg
aacgattga
DBGET
integrated database retrieval system