Formica exsecta (narrow-headed ant): 115236508
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Entry
115236508 CDS
T07422
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115236508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115236508
Spliceosome [BR:
fex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115236508
Complex C
U5 SnRNP specific factors
115236508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
115236508
NCBI-ProteinID:
XP_029664878
LinkDB
All DBs
Position
Unknown
AA seq
2367 aa
AA seq
DB search
MSIPPYLLGPNPWATMMAQQQVQLAAAQAHAQAAAHAQAAHHAHMQAIAGPPLPQIPKQP
EVLSEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPAEHIRKIIRDHGDMSSRKYR
HDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIA
QWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEEDES
VASWFYEHKPLVGTKHVNGSTYRRWNLTLPQMATLYRLANQLLTDLVDQNFFYLFDPKSF
FTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNM
PHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTMEPQIEDDEDFILPGE
VQPFLQEIPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPVKV
RVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNM
LNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQ
YRLNNVDAFQLADGLQYIFAHVDQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGK
GPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDL
ELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYI
KMKADWWTNTAHYNRERIRRGATVDKTVCKKNLARLYLKAEQERQHNYLKDGPYISPEEA
VAIFTTSVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGL
IEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVKPLEKITDAYLDQYL
WYEADKRRLFPPWVKPADTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKFEKLYE
KIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIAQYYGL
VLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLYCRYVDRIHLFLRFSADEA
RDFIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSTT
IQWENNFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEITKERTAQ
CFLRVDDESLQRFHNHVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDL
LVKCENKIQTRIKIGLNSKMPSRFPPVVFYTLKELGGLGMLSMGHVLIPQSDLRWSKQTD
VGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLILED
LEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNL
NNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLN
QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHE
SIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWTVSRPSLLAD
SKDVMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDL
AYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQN
YGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVW
AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGS
ELQLPFQACLKVEKFGDMILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNT
ERTKVVLKPDKTTITESHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVASLTQSEI
HDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEITATTSNYETQTFS
SKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYL
YGISSPDNPQVKEIRCIVMAPQWGTHQTVHLPNTLPNHQYLKEMEPLGWIHTQPNELPQL
SPQDISTHARIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTDKGNNP
KGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEV
HRPAHFLNFSSLEDGEGVGADREDMFA
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccaccatatttgctgggtccaaacccatgggccacaatgatggcccagcaa
caagttcaattggcagctgcccaagcgcacgctcaggctgcggctcatgcacaagccgct
catcatgctcacatgcaggctatagctggcccgccattgcctcagattcctaaacaaccg
gaagtcctgtctgaggacaaacttcaagaaaaagcacaaaaatggcagcagttgcagtca
aagcgtttcgcagaaaagaggaagtttggctttgtagatgcccaaaaagaagatatgcca
gctgaacatataagaaaaatcattagagatcatggtgatatgagtagtagaaaatacaga
cacgataaacgtgtttatttgggggcgttaaagtacatgccacatgctgttatgaaacta
ttggaaaatatgcctatgccatgggaacaaataagagatgtaaaggtcttgtatcatatt
actggagccattacatttgtcaatgaaataccttgggttatagaacctgtgtatatagct
cagtggggcactatgtggattatgatgagacgagaaaaaagagatcgcagacatttcaag
agaatgagatttccaccttttgatgatgaagagcctcctctagattatgcggataatgtt
ttggatgttgaacctttagaggctatacaaatcgaacttgattcggaagaagatgagtcg
gttgcatcatggttttatgagcacaagccattagttgggacaaaacatgttaacggatct
acataccggagatggaatctgacattaccgcaaatggctactttgtatcgtttggctaat
caattgttgactgacttagtggatcaaaattttttttatctgtttgatcccaagtcattc
tttactgcaaaagccttaaatatggctattcctggaggaccaaaattcgagccactggta
aaagattcaaatgctgctgatgaagattggaatgaattcaatgacataaataagattatt
atcaggcaacctattaggacagaatataggattgcgtttccttacttatacaataatatg
ccacattttgttcatctttcatggtatcatgctccaaatgtcgtatatataaagactgaa
gatccagatttgcctgcattttattttgatccgttaatcaatccaatttctcatagaaat
tcgctaaagacgatggaaccacaaatcgaagatgatgaagactttattctacctggcgaa
gtgcaaccattccttcaggaaatacctctttatactgataatacagcgaatggaatagcc
cttttgtgggcgccgcggccgtttaatacacgttccggtagaacaagaagagccattgat
attcccttagtcaagtcatggtacagagagcactgtccacctggtcaacctgtaaaagtg
cgagtcagttatcagaaactactgaaatacttcgttctgaacgctttgaagcacagacca
ccaaaaccacaaaagaaacgttacttgttccgctcttttaaatcgaccaagttctttcag
acaacgacaatagattgggtagaagccggtctgcaggtgtgtcgtcaaggatataacatg
ttgaatctactaatacatcggaagaatctcaactatcttcatttggattacaattttaac
ttgaaacctgtcaaaacgcttacaacaaaagagaggaagaaatcgcgctttggtaacgcc
ttccatttgtgtcgcgaaattcttcgcttaactaaactcattatcgattctcacgttcag
taccggctgaacaacgtggatgcctttcaactcgccgatgggctgcaatatattttcgca
cacgttgatcaattgaccggcatgtatcgatataagtacaaattgatgcgacagatcagg
atgtgtaaagacttgaagcacctaatttattatcgttttaacaccggaccagttggtaaa
ggacctggctgtggcttttgggcacccggctggcgcgtttggttattctttatgagaggc
atcactccgttattggaaagatggctgggtaacttattgtcgagacaattcgagggccgt
cattcgaagggcgtagcgaagactgtaacgaagcagcgagttgaatcacactttgatctc
gaattacgggcgtctgttatgcacgatatagttgatatgatgcctgagggaataaagcag
aacaaggcgcggacaattcttcagcatttgagcgaagcttggcgctgttggaaagcgaat
attccgtggaaagtgccgggtttgccgattccgatcgaaaacatgatactgcgttatatc
aagatgaaggccgactggtggacgaatacagctcattacaatcgagagagaattcgacgt
ggagctacggtggacaaaaccgtgtgtaaaaagaaccttgcgcgtctctatttgaaagcc
gagcaggaacgacaacacaattacttgaaggatggtccatatatatcgccggaggaagct
gtagccatatttacaacttcagttcattggctagaatctcgaagattcgcgccaataccc
tttccgccattatcttacaaacatgatacgaaactgttgatattagccctggaacgcttg
aaggaggcttatagcgttaaatctaggctgaatcaaagtcaacgagaagaactgggctta
atagaacaagcatacgataatccacacgaggcattgtccagaatcaagcgacatttgcta
acacagagagcttttaaagaagttggcatcgaatttatggatctttacagtcacttgatt
cccgtgtatgacgtgaagccattggagaaaattacggatgcctacctagatcagtatttg
tggtacgaggcagacaaaaggcgactgttcccaccgtgggtgaaaccagctgacacggaa
ccaccgccgctccttgtttacaagtggtgtcaaggtatcaataatctccaggatgtttgg
gatgttagcgagggcgagtgtaatgtgctgctagaatcgaaatttgagaagctgtacgaa
aaaatcgatctcacgttactcaacaggctgttacgtttaatagtcgatcataacattgcc
gattatatgacggcaaagaataatgttgtcatcaattataaagacatgaatcacactaat
agctatggcattattcgaggattgcaattcgcatcttttatcgcccaatattacggacta
gtgttggacctgctggtgttgggtcttcagcgagccagtgaaatggccggtccgccgcaa
atgccaaacgacttccttacgtttcaagatgttgcctctgagacagcgcatcctattcga
ttatactgccgttatgtcgataggatacatctatttctgcgcttttccgctgatgaggcg
agagacttcattcagcgttatctcactgaacatcccgatccaaataacgaaaatattgtt
ggctacaataataaaaagtgttggccgcgagacgcccgtatgagattaatgaagcacgat
gtgaacctgggtcgcgccgtattctgggatatcaagaaccgacttccacgttctaccact
atccagtgggagaacaattttgttagtgtttatagtaaggataatcccaatttgctcttt
aatatgagcggtttcgagtgcagaattttgcccaaatgcagaacgactcatgaggagttt
acgcaccgagacggcgtttggaatcttcagaacgagatcacgaaggaaagaaccgcgcaa
tgtttcttgcgtgtcgacgacgagagcttgcagcgttttcacaatcatgtcaggcagatt
ttaatggcttcaggctcgaccacattcacgaaaatcgtgaacaaatggaacaccgctttg
attggtctgatgacttattttagagaagccgtggtgaatacgcaagagttgttggatctt
ttggtcaaatgtgagaacaagattcagacgcgtatcaagattggattaaactccaaaatg
ccgtcgcgtttcccacccgtcgtcttttatactcttaaggaattgggtggtctgggaatg
ctgtcgatgggtcatgtgttgatacctcagtcggacttgaggtggtcgaaacaaactgat
gtaggcattactcactttcgttcaggtatgagtcacgacgaggatcaattgattcctaac
ttatatcgctacatacagccctgggaatcagaatttatcgattctcaacgtgtttgggca
gaatatgccctgaaacgacaagaggccaatgctcagaatcgcaggcttattttggaagat
cttgaggacagctgggatcgtggtatccctaggataaatacattattccagaaagatcgg
cacacactggcctatgacaagggttggcgtattcgtacagaattcaaacaatatcaggtg
ctgaagcaaaatccgttttggtggactcatcagcgtcacgacggaaaattatggaaccta
aataactatcgaactgatatgattcaggcgctaggcggcgtcgaaggcattcttgagcac
actcttttcaaaggcacctacttcccgacatgggagggtctcttctgggaaaaggcttcc
ggctttgaggagtccatgaaatacaagaaattgacaaatgcgcaacgttctggtctcaat
caaattcccaaccgtcgatttacactgtggtggtcgcctactattaatcgtgcaaacgtt
tacgttggttttcaagtacaactcgatctgacaggaatatttatgcatggtaaaataccg
actctaaaaatatccttaattcaaatatttcgcgctcatttgtggcaaaaggtgcatgaa
tctatcgtgatggatctttgccaggtgtttgatcaagaattagacgcattggaaattgag
accgtacagaaggaaacaatacatccgcgaaagtcctacaagatgaactcctcatgtgct
gacatccttttgttttccgcttataaatggaccgtatcccgaccatcactccttgctgat
tcgaaagatgtgatggacaacaccactacacagaaatattggatcgatgttcaactgaga
tggggcgattatgactcacatgacatcgaacgatacgctcgtgctaaattcttggactat
acgacagataacatgtcgatatacccatcgcccaccggtcttctgatagctatcgacctg
gcatataatttgcacagtgcatatggtaattggtttcctggctgcaagccactcatacag
caagctatggcaaaaattatgaaagcaaatcctgctttatacgtattacgcgaacgcata
cgtaaagccttgcaactatactcgtctgaacccactgaaccttatctttcttcgcaaaat
tacggtgaactcttctccaatcaaattatatggtttgttgatgacacaaacgtatatcgc
gtgacgattcacaaaacctttgagggcaacttgacgacaaagccaatcaatggcgcaatt
ttcatcttcaatccgcgcacgggacaattgtttctgaaaattattcatacctccgtctgg
gcgggccagaagcgtctcggtcaattagccaagtggaagaccgccgaggaagtcgctgcg
ctgattcgctctctaccagtggaggaacagccaaagcagattatcgttaccagaaaagga
atgttagatccgctagaagtgcacttgttggattttcctaatatagtcattaaaggatct
gaattgcagttaccgttccaggcatgtctcaaggtggagaagttcggcgatatgatcttg
aaggcaaccgagccgcaaatggtactattcaatctttacgatgactggttgaagaccatc
tcgtcttacaccgcattctcacgattgattctgattttacgggctctacacgtcaacacc
gaaagaacgaaagttgtattaaagcccgataaaaccaccattaccgaatcacatcacata
tggccatcgctgacggacgatgagtggatcaaggtggaagtgcagctgaaggatctgatc
ttggcggattacggtaagaagaataatgtcaatgttgcgtcactcacgcaatccgaaatc
cacgatatcattctgggtatggagataagtgcgccgtccgcgcaacgtcaacaaatcgct
gaaatcgagaagcaaactaaagagcagagtcagcttaccgccactaccacacgaacagta
aacaagcatggcgacgagattactgcgaccacgtccaactacgagacacagactttcagt
tcaaagactgaatggcgagtacgtgccatttcagcaactaatcttcatctccgaacaaat
catatctacgtctcgtctgatgacatcaaagaaactggctatacttacattttgccgaag
aatgtactcaagaaatttgttactatttccgatctgcgagcgcagatagccggctatcta
tacggtatcagctctcctgataatcctcaggtgaaagaaatcagatgcattgtaatggca
ccacaatggggaactcatcaaactgttcatctaccaaacacgttacctaatcatcaatac
ttgaaggagatggaaccattgggatggatacatacgcagcccaacgagctgccgcaactg
tcaccgcaggacatatctactcacgcccggattatggcagagaattccatctgggacggt
gaaaagactatcgttatcacttgcagtttcacacccggttcttgctctcttacagcatac
aagttgactccgagtggatttgagtggggcaagcagaacactgataagggaaacaatccg
aagggttatttacctagccattacgaaaaggtacagatgcttttgtccgatcgtttcctt
ggcttttttatggtgcccagccaaggttcatggaattacaattttatgggtgtaaggcat
gatcccaacatgaaatacgagctacaactagcgaatccaaaagaattttatcatgaagtg
cacaggcctgctcattttctcaacttctcgagtttggaagacggtgaaggcgtcggggct
gatcgagaagacatgtttgcataa
DBGET
integrated database retrieval system
