Formica exsecta (narrow-headed ant): 115236862
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Entry
115236862 CDS
T07422
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115236862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115236862
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115236862
Spliceosome [BR:
fex03041
]
Complex C
Other components
Step II factors
115236862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
T2SSE
Cas3-like_C_2
nSTAND_NTPase5
AAA_30
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
115236862
NCBI-ProteinID:
XP_029665442
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MRDFIPTTAHHCCAEGDENSSEKIAHLVTYTMEEVTKLEHLSLVSKICTELENHLGLNDK
DLAEFIIHLAEKNNTFAAFKKVLIENGAEFSDSFMANLLRIIQHMKPAKTSAEKSSKLIN
KQDEMALKFPALALPNNDPQYSDIKNAKDEDIVNNVMASLEAFAPSNKKHSRGTERNNSK
IDGCEKKDKRRKRSRSRSKADEDEKHLRNPDRPTSLLELQGNYDEDETYSRKRVQRLSSP
EKWEIKQMLAASCIDRNELPEFDTETGILPREDDEEEDVEIELVEEEPPFLHGHGRALGD
LSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSVPTGLNKNWIDPLPEAES
RTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTLLEQRQTLPIYKLRDDLVKAV
TDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVATMSVAKRVAEEFGCCL
GQEVGYTIRFEDCTGPETSIKYMTDGMLLRECLMDLDLKTYSVIMLDEAHERTIHTDVLF
GLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFEVEVMYTKEPETDYLD
AALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPS
EMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLIVTP
ISQAAAKQRSGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGIN
DLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGRRMAEFPLEPNLSKMLIMSVH
LQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLTLLAVYNSWKNNKLS
NAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQKAVCSGFFRNAAKK
DPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAP
AFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgactttattcctacgacagcgcatcactgctgcgcagaaggtgacgaaaattcg
tccgagaagatagcacatcttgttacttacaccatggaagaggttacaaaattggaacat
ctatctctggtgtccaaaatctgcacagaattggaaaatcatcttggattgaacgataaa
gatttggctgaatttattatacatctagctgaaaagaacaacacgtttgcagcattcaag
aaagtattgattgagaatggagccgagttctcagactcctttatggcaaatcttcttaga
ataatacagcatatgaaacctgctaaaacatctgccgaaaagtcatcgaaacttataaat
aaacaggacgaaatggctttgaaattccctgcgctggcattaccaaacaatgatccgcaa
tattcagatatcaaaaatgctaaagatgaggatattgttaacaatgttatggcttcttta
gaagcatttgcaccatctaataaaaagcattctagaggtactgaaagaaataatagtaag
attgatggttgtgagaagaaagacaaacggagaaaaagaagcagaagcagatcaaaggca
gacgaggacgagaagcatctgcgtaatccagataggcctacttccttgttagaactacaa
ggtaattacgacgaggacgagacgtactcgagaaagcgcgtgcaacgtttatcatcgcca
gagaagtgggagattaaacagatgttagcagcatcgtgcatcgataggaacgagttacca
gagttcgacacggagactgggattttgccgcgagaggacgacgaagaggaggacgtggag
attgagctcgtcgaagaagagccaccgtttctgcacggtcatggtagagcactgggagac
cttagccctgtgcgaatagtgaagaatccggacggctcgctggcgcaagcagcgatgatg
cagagcgccttagcgaaagagcggagagagcaaaagatgctgcaacgcgagcaagagatg
gactctgtgcccactggtctgaataagaactggatagatccgttgcctgaagcggaaagc
cgtacactagcggcgaacatgcgcggcatcggactacaaacgcaagatctgcccgaatgg
aagaagcacgtgataggcggtaagaaatcttcattcggtaagaagaccaacctgacactg
ttggagcaacgtcagaccttgccgatctataaactacgcgatgatctagtgaaagcggta
acggacaatcaaattctgatcgtcatcggagagaccggctcgggcaagacgacacagatc
acgcagtatctagcggaggccggttttaccgcacgcggcaagattggctgcacgcaaccg
cgccgcgtggcaactatgagtgtggccaagagagtggcagaggagtttggctgctgtctg
ggccaggaagtgggctatactatccgttttgaggattgcaccggaccggagactagcatc
aagtacatgaccgatggtatgctgctacgcgagtgcttgatggacctcgatctgaaaact
tactctgtgatcatgttggacgaggcgcacgagcgcacgatccacacagacgtattgttc
ggcctgctgaaacaggcggtaggccgtaggcccgatctcaagctaatcgtcactagcgcc
accctggatgcggtcaagttttcgcagtattttttcgaggcgccaatctttaccattccc
ggacgcacgtttgaagttgaggtgatgtacacgaaagagccggaaacagattatttggac
gccgcgctaatcaccgttatgcagatccatttgcgcgagccgccgggcgatatcctgctc
tttctcaccggtcaagaggagatcgatacagcctgcgagatcctttacgagcgcatgaaa
tcgctgggtccggatgtgccggaactaatcattcttcccgtttattcggctctgccatcg
gagatgcaaactaggatatttgagccagcaccgcccggctcgcgcaaggtcgtcatcgca
acaaacattgccgaaactagcctgacgattgacggcatctattacgtcgttgatcccggc
ttcgtcaagcaaaaagtttataattccaagactggtatggatagtctcatagtgactcct
ataagtcaggcggcagcgaaacaacgtagcgggcgagccggcagaaccggacccggaaaa
tgttacaggctctacaccgagcgggcttatagagacgagatgttgcccacgccagtgccg
gagattcagcggacaaatttggccaccaccgtactgcaactgaaaactatgggtatcaac
gatcttttgcatttcgattttatggatgcgccgccggtggagtcactgatcatggcgtta
gagtcgttgcacagcttgagcgcccttgacaacgagggtttactgacgcggttgggtcgg
cgaatggcagaatttccactcgagccaaatctatccaagatgttgatcatgagcgtgcat
ctccaatgctccgacgagatcctgaccatcgttagcatgctatccgttcagaacgtcttt
tatcggccgaaggataagcaggctttggccgatcagaagaaggccaaatttaatcagccc
gagggcgatcacttgaccctactggcggtctataattcctggaaaaataataaactaagt
aatgcgtggtgttatgagaactttgtgcagatcagaacgctgaagcgcgcccaagatgta
cgcaagcaactgctgggcataatggacaggcacaaactagatgtagtatcggccggcaaa
aatacggtgcgcatacagaaggcggtatgttccggatttttcagaaacgccgcgaagaaa
gatccgcaggagggatacagaacgttggtcgacagccaagtcgtgtatattcatccgagt
agcgcattgttcaatcgtcaaccggaatgggtcatctatcatgaattggtgcagactacc
aaagaatacatgagagaggtgacgaccattgatccaaagtggctagtggagtttgcgccc
gcgttcttcaaatttagcgatccgaccaaactcagcaagtttaaaaagaatcagagacta
gaaccgctttataataaatatgaggaaccaaatgcgtggaggatatcccgggttcgcagg
agacgtaattaa
DBGET
integrated database retrieval system
