Formica exsecta (narrow-headed ant): 115237198
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Entry
115237198 CDS
T07422
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115237198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115237198
Spliceosome [BR:
fex03041
]
Complex A
U1 snRNP components
U1 related factors
115237198
Complex B
115237198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
RhoGAP-FF1
HVO_2833_C
Spherulin4
Motif
Other DBs
NCBI-GeneID:
115237198
NCBI-ProteinID:
XP_029665947
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MASNDGIPPSAAVPGFSSTTPNIASSFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPPP
GFTFPITAAPSPEAGVIAASPQITAPGIPPPSPIANDATSSTMSVSTSEKKTDWSEHKAP
DGRTYYYNSITKQSLWEKPDELKTPNELLLSQCPWKEYKSENGKIYYHNVTTKESRWTIP
PELEELKNRILAEEAAAVAAAAVANATNSNIVPVAMQHLSPNITTISQTSTPEPGGKSAI
EQAMAATLAAINIPTPPTKPDEDSNSAMGSANDSRTSTPEPKMQFKDKKEAIEAFKELLK
ERDVPSNATWEQAVKLIQNDPRYPQMKKLNERKQVFNSYKTQKLKEEREQERLRLKKAKE
DLEQFLLENDRMMSTTKYYKCEELFGNLEIWRAVGDSDRRDIYEDVIFNLAKREKEEAKQ
LKKRNTKRLAQVLDTMTEVTYRTTWQEAQALLLQHPAFAEDADLLEMDKEDALIVFENHI
RQLEKDEEEEKECEKKRRKRQERKNRDGFIYLLDELHEQGKLTSMSLWVELYPMLSADLR
FSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVCE
DRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQMTW
EEVRAKIEEEQDFKAITLESERIRIFKEYQHELEESCSHHHIRSKKKKAKKLKRKSRSRS
HSESEGSDKGLKRKRHKSRSPSIPSKSDSSESETRKSKRKKNKRKRGRSHSRSHSRLASS
EEASPERKRKEEKHRRPSVHSEGSVTENNEHHELSEDELEKQRAQLLRELQMQQEEN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacgacggtattccaccatctgccgccgtaccaggattctcatcgacaacg
ccaaatattgcatctagctttgtgccacccattatgcctacggcacccttcattcctcct
cccagtctaccgccaggtcctccgggtataatgccgcctcagttttctatacctccgcca
ggttttacttttcccatcaccgctgcaccttctccagaggctggagtcatagccgcatcg
ccgcagataacagcaccagggattcctcctccttcacctatcgccaacgacgctaccagt
tcgacgatgtccgtctccacgtcagagaagaagaccgattggagcgaacataaagcaccg
gatggcagaacgtattactataatagtattacgaaacaatcattgtgggagaaaccggat
gaattgaagaccccaaatgaattgttgttgtcgcagtgtccttggaaggaatataaatcg
gagaacggcaaaatatattatcacaacgtaacaaccaaggagtccagatggacgataccg
ccggaactggaagagctgaaaaatcgaatcctggccgaggaagctgcagcggtcgccgcg
gccgctgtagcaaacgccacaaattccaatatagttcctgtagccatgcaacacttatca
ccaaatatcacgactatatcacagactagtacgccagaaccaggtggaaagtctgccatc
gagcaagcgatggccgcaaccctcgcggcgattaatatcccgacgccacctacaaagccg
gacgaggatagcaattccgcgatgggctcggctaatgacagtcgtaccagcacccccgag
ccaaagatgcaatttaaagataaaaaggaagcaattgaggcgtttaaagaattattaaag
gaaagggacgttccgtcgaatgctacgtgggagcaggcggttaaattgattcagaatgat
cctagatatccacagatgaagaaattgaatgaacgtaaacaggttttcaattcgtacaag
acgcaaaagttaaaggaagagcgtgaacaagagagactcagattgaaaaaggcaaaggaa
gatctggagcaatttttattggaaaacgatagaatgatgagtacaactaagtattacaag
tgcgaggagttgtttggtaatctggagatttggagggctgtcggggattcggatcgccga
gacatttacgaggatgtcatcttcaatctggcaaaacgcgagaaagaggaggcgaaacaa
ttaaagaaaagaaatactaaaagactggcgcaagttctggataccatgaccgaagtgacg
tacaggaccacatggcaggaagcacaggcattgttgctacagcatcctgcgtttgcggaa
gatgcagacttactggagatggacaaggaggatgctttgattgtcttcgagaatcatatt
cgccaattggagaaggatgaagaagaagagaaggagtgtgagaaaaaacgtaggaaacgg
caggaaaggaaaaacagagatggtttcatatatttacttgatgaacttcacgaacaaggt
aaactcacgtcaatgtcgctgtgggtggaattgtatcccatgctgtccgccgatcttcga
ttttcggctatgctcggacaatcgggttcgacccctttagatcttttcaaattttacgtc
gaagacttgaagtctcgattccacgatgagaaaaagatcattcgtgagatacttaaagac
aagaatttcgaagtgcaagtcaatacgactttcgaggagttcgccacagtcgtgtgcgaa
gaccgaaagtcggccactctagatgcgggtaacgttaaattaacatacaatttattgctc
gaaaaagcagaagcgcgcgaaaaggaacgcgtcaaggaagaaacgcgaaagtttaagaaa
ttagagaccggtttcaaaaatttactcaagacgttaaatgtggactatcaaatgacatgg
gaagaggtgagggcgaaaattgaggaagaacaagatttcaaggcgatcactttagaaagc
gaaagaatacgcatattcaaggaatatcagcatgaacttgaggagagttgcagtcatcat
catattagaagcaagaaaaaaaaggcgaaaaagttgaaacgtaaatcacgatcgcgttcg
catagcgaatcggaaggtagtgacaaaggtttgaagagaaaacggcataagtcacgttca
cccagtattcccagtaaatccgacagttctgaatcggaaacgaggaaatctaagagaaag
aagaacaaacggaagagaggtcgtagtcattctcgctctcattcgagacttgcatcttcc
gaggaggcttctccagaaagaaaacggaaagaggaaaagcacaggagaccttcagttcac
agtgagggatctgtcacggaaaataatgagcatcatgaactttccgaagacgaactagaa
aaacaacgtgcgcaacttttgcgcgagctccaaatgcaacaagaggaaaattaa
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