Formica exsecta (narrow-headed ant): 115237221
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Entry
115237221 CDS
T07422
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03013
Nucleocytoplasmic transport
fex03015
mRNA surveillance pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115237221
09122 Translation
03013 Nucleocytoplasmic transport
115237221
03015 mRNA surveillance pathway
115237221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115237221
03041 Spliceosome [BR:
fex03041
]
115237221
03009 Ribosome biogenesis [BR:
fex03009
]
115237221
03012 Translation factors [BR:
fex03012
]
115237221
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115237221
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115237221
mRNA cycle factors
Stress granule specific factors
115237221
Spliceosome [BR:
fex03041
]
Complex C
Other components
EJC/TREX
115237221
Ribosome biogenesis [BR:
fex03009
]
Eukaryotic type
90S particles
Helicases
115237221
Translation factors [BR:
fex03012
]
Eukaryotic type
Initiation factors
eIF-4
115237221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
115237221
NCBI-ProteinID:
XP_029665983
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MADKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSI
KPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDES
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaatcacgtcgtgtggcgcaaacagaggatttatcaaacgtcgagtttgaa
accagcgaagatgtcgaagttattcctaccttcgataatatgggtctccgcgacgaattg
ttacgtgggatctacgcatatggtttcgaaaaaccgtctgctattcagcaacgatccatt
aaacctattatgaaaggcagagatgtgatagcgcaagcacaatctggtacaggaaagacc
gctactttctcaattgcaatattgcaatcattggacacacaagtacgggaaactcaagtt
ctggttttgtcgccaactcgggaacttgcaactcagattcagaaagtcatcctcgcatta
ggagactttatgaatgtgcaatgtcatgcttgtatcggtggcacaaatcttggggaagat
atcagaaagctcgattatggtcaacatgttgtatctggcacacctggtagagtatttgat
atgatcaagagacgggtacttagaaccagagctatcaaaatgttagtgctggatgaatcc
gacgaaatgttgaacaaaggcttcaaagagcaaatttacgacgtatatcgatatctacca
ccggcgacacaagtggttctagtttcagccactttaccacatgaaattcttgagatgact
agtaaatttatgacagatcctattcgtattcttgtcaaacgtgatgaattgacgttggaa
ggaattaaacaattctttgtcgctgtagaacgagaagaatggaaatttgacacactttgc
gacttgtacgacacattaacgataacacaagcagttatcttctgtaacaccaagcgtaaa
gtagattggttgacagaaaagatgcgagaagctaactttactgtgtgctctatgcatgga
gacatgcctcaaaaggaacgagacaacataatgaaagaattccgatctggtcaaagtcgc
gtgctaatcacaacggacgtctgggcgagaggtatcgacgttcagcaagtgtcactcgta
attaattacgatttacctaacaatcgtgaattatacattcatagaataggtcgatcgggt
cgtttcggtcgtaaaggtgtctcgataaactttgtaaaaactgatgatataaggattctt
cgagatatcgagcagtattactctacacaaatagacgaaatgccgatgaacgttgccgac
ctgatataa
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integrated database retrieval system
