Formica exsecta (narrow-headed ant): 115237352
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Entry
115237352 CDS
T07422
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115237352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fex04121
]
115237352
Enzymes [BR:
fex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115237352
Ubiquitin system [BR:
fex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115237352
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115237352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
zf-C3HC4_2
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
zf-RING_2
WD40_like
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT140_1st
zf-C3HC4_4
zf-RING_10
WDR54
PUMA_CC
zf-ANAPC11
zf-RING_6
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
115237352
NCBI-ProteinID:
XP_029666203
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MSTPGNSNMGNDSSAGSSCGGLGDSSSKINKLHQPTNVLQRMTGILEDKSNDYMCPICFD
LIDTAYITRCGHTFCHHCIVKCLEIKDRCPKCSFTLNEQDIFPNFLLDELVSKYKTRTKG
LAQLGSYTENGRHRMIGNDSSVPASDGLRSIVAAESANLTLPDVNVMLEVLTQRKHLLEA
ETCTAQNKLLHEFLKHLLQQKEEQRNQLQKEVVLIKKDMEEVENILKDVQSKCPRVEDVK
KASENDTAQVSAIRREMLGLIDIIDSNMVKPSDKVISGTDSLINPNVSQPSGSTLAIRRK
RLHAHFDDFVQCYFDSRGKELLLGQKSQSQSETQQHGGAHSTSSGLDVFRENLVKFSRYN
SLRPLATLNYSSDLFNNSTIVSSIEFDKDNEFFAIAGVTKRIKVFDYGAVIRDTVDIHYP
CVEMVSSSKISCVSWNSFHKGMLASSDYEGTVTVWDATTGQRTKAFQEHEKRCWSVDFND
VDTRLIASGSDDARVKLWALNTDYSVASLEAKANVCCVKFNPRSSCHLAFGSADHCVHYY
DLRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKMWNINNPLCLRSFVGHVNEK
NFVGLATDGDYVACGSENNALYVYYKGLTKQLFSYKFDAVRSILELQDRREEDLNEFVSA
VCWRQMSNVVVAANSQGIIKILELV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcctggcaacagtaatatgggaaacgatagcagcgcagggagcagttgtggt
ggattaggcgacagtagcagtaaaattaataagcttcatcaacctacgaatgtgttacaa
aggatgaccgggatattagaagataagagtaacgattacatgtgtccaatttgcttcgat
cttatcgacacggcgtatatcacgcgttgcggacatacgttttgtcaccattgtatcgta
aagtgtttagagattaaggatcgttgcccaaaatgcagttttacattaaacgaacaggac
atcttcccgaactttctgttggacgagctagtttccaaatataagacaagaactaagggc
ctagcgcagttaggctcttacacggagaatggtagacacagaatgatcggtaacgattcg
tcggtacccgcgtccgatggattaagaagcatcgttgcagcagagagcgccaatctcact
ctacctgatgtaaatgtaatgttagaggtgctgactcaacgaaagcatttactcgaagca
gagacttgtacagcgcaaaacaaacttctgcatgaattcctaaagcatctgttgcaacag
aaggaagaacaaaggaatcaattgcaaaaggaagtggtgttgatcaagaaggatatggaa
gaagttgagaatattctaaaggacgttcagagcaagtgtccacgggtggaagatgtcaaa
aaggcgagcgagaatgacacggcgcaagtttcggccattagacgggaaatgctcggcctt
atagatataatagactcgaatatggtgaaacctagcgacaaggtgatcagcggcactgat
agtttgattaatccaaacgtcagtcagcccagtggatcaaccctagctatacgtaggaag
agactgcacgctcatttcgatgactttgttcaatgttattttgattcccgtggcaaggag
ctactgcttggacaaaaatcgcaatcacagagcgaaacgcagcaacacggcggagcacat
agcacaagttccggtctagacgtttttcgtgagaatctagtcaagttctcaagatataat
tccctgcgtccattggcgactctcaattactcatcggatctcttcaacaattccacaatc
gtttccagcatcgagttcgataaggacaacgagttctttgcgatcgccggtgtaacgaaa
cggataaaggtattcgattacggtgccgttatacgtgacaccgttgacattcattatcct
tgcgttgagatggtctccagttcgaaaatctcgtgcgtctcgtggaattctttccacaag
ggtatgcttgcctcatcagactacgagggtaccgtgacagtatgggacgcgacgaccggt
cagagaaccaaggcgtttcaagaacacgaaaagagatgctggtccgtcgatttcaacgac
gtggacacgcgattgatcgcatctggctccgacgacgcccgggtcaaattatgggcgttg
aataccgattattccgtggcgtcgttggaggccaaggcgaacgtatgttgcgtgaagttt
aatccacgcagttcttgtcatctggcatttggttccgcagatcattgcgtacattattac
gatttgcgtaacatgaaggaggcgttatgcatattcaagggccatcgtaaggccgtttcg
tacgttaagtttatcaacaaggaggagattgtctctgctagtacggattctcagttgaaa
atgtggaatataaataatccgctttgtctacgatcgttcgtgggacatgtaaacgagaaa
aattttgtcggactcgctactgatggcgattacgtcgcctgcgggtcggaaaataacgcg
ttatacgtgtactataaaggactaacgaaacaattgttttcttacaaattcgatgccgtt
cgaagcatactggaactgcaagatagaagagaggaagatctaaatgagtttgtgtccgcg
gtatgttggagacagatgtccaatgtcgtggtagccgctaactctcaaggaattatcaaa
atattagagttggtttaa
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