Formica exsecta (narrow-headed ant): 115237665
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Entry
115237665 CDS
T07422
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fex03009
]
115237665
Ribosome biogenesis [BR:
fex03009
]
Eukaryotic type
90S particles
Other 90S particles
115237665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Suf
TPR_14
OB_RRP5_4th
TPR_19
S1_2
TPR_15
ARM_TT21
ARM_TT21_5th
TPPII_C
TPR_6
Motif
Other DBs
NCBI-GeneID:
115237665
NCBI-ProteinID:
XP_029666724
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MESFPRGGKKPAIKRSSNTLFDEQSKSNKKHKTQIKTTDNNISMKEINFIATAERLSNAT
LREGMTILGRISRVSEYDLIVSIPGGILGRVEVTNLSESYTNLLQNIISTKTIQSNEFKP
LPDLYNPGDYVVCYVKSIDLQGKWLYSLSLEPQLINQNVYNSYLVKNAKIVCTIKSIEDH
GYVVDTGIANVRAFLATENVDKEKKYFPGNQLLCIIKEIETADYSFVIKLSAKKRKINNV
IVHDIASLDVITPGTKLSLCVTKVLSNGLQVTFGKDNIGYINQIYLNNPLSMYTENMEVT
GILLYILPTVKLAYFSLLTDESEKERLSKGDIIRKAKVLYRESNGIILNISKSGLHGFVS
LLKTNVPFAKIPTEFKQGSTHKCRILAYNWIEHLYVCTMEDKILKQKYFSASDLNCGDII
TVTITDIDTSNGYIHVQAGNISGFVPPIHVSDSGLSALNKLKIGDSIEARVLHLKTSSYN
TNVMFTLKQSLIKSKLPVLHDIHDAQCGSKYHGTITKIDKNGLLVRFYGAIKGWVPRSAL
NGDTYNMNWNYSIGQTLTVCTESIEKNENKMKLKVVTEEQKQQAVRFSIGEMIEGTVTES
SIKGVYLRIHGDDENVTTGFLPAGHMAPCIEIGSLLASRCTPGDVISALVFATKPGIILS
RTFVTQEQYRSFDLLKVGDCIPCTIRDISQDGVRVVLPIENYSKLGFVSYKNINNFELLH
VNQILFVKITAINMREKYLTLTMALKDVWDSPLEKEVKMMTAVDVLSLYLNRLSELAKNT
FYDNKPISLAVLGQKITGTVEKITKHGLVLRLDNHLTGTVRKDHYSGEFRVGDKVSGTIL
WKNYVHELVDVSLLPRIINGISSKQKTLPELPTGVVLRAEILMITKWLILVLIKRNGAGY
LAVLPVRRHLNDISPDLTPYMIHARIRLYVIMTGNESDIVPVCMLKSAFETKISKEATVT
TKKKLKRKKISEQHNVTLTNPTEQASEKDNKKEYEVEIKEEETRIKDIDEYSELSKDSSD
ESEKGEDKPIADKLHIQECGFSWDDKANLATSAETSSDDEEEPEEEPKRKKKLSAAERRE
QEREKERKIRQREEALASNKMPNSTDQFDKLVLSNPDSSLVWLQYMAYHLQATEIDKARA
IAKRAIKTINFREENERLNVWNAWLNLESRFGTLESLNNVFQEAVQTNDAFRIYTHMLTV
HADAGKKIELEKLIDTMIGKFKQNPQTWINCGAALLKIGLKEKSRHIMQRAVQSLPASQH
VNLLVRFANLENKLGDKERAQTLFEHILSSYPKRVDVWSCYVDCLIKSEDIDIARRVLER
ACVQTLPARKMKTLFTKFKSFEEKYGTPEAVARIVQMAAEYVEKQCNI
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggagagttttcccagaggcgggaaaaaacctgcaattaagagatcatcaaatacgtta
tttgatgagcaatctaaatcgaacaagaaacataagactcagataaaaacaacagataac
aatataagtatgaaagaaataaattttattgctactgcagaacgtttatccaacgcaaca
ttacgtgaaggaatgacaattcttggccgaatttcgcgagtgtcagaatatgacttaatt
gtatctataccaggtggaattttaggacgtgtagaagtcacaaatctcagcgagtcatat
acaaatctgttgcaaaatataatcagcacaaaaaccatccaatcaaatgaatttaagcct
ttgccggatttatataatcctggtgattatgtagtatgttatgtcaaaagtatagatctt
caaggaaaatggttgtacagcttatctctggagccacaattaataaatcagaatgtatat
aatagttatcttgtaaaaaatgcaaagatagtttgcactattaagagtatagaagatcat
ggctatgtagttgacacaggcatagctaatgttagagcatttcttgctactgagaacgtt
gataaagaaaagaaatattttccaggtaatcaacttttgtgcataattaaggaaatagaa
acagcagattactcgtttgtcatcaaattgtcagctaagaaaagaaagattaataatgtt
atcgtacatgatatagcttctttagacgttataacaccaggaacaaaattatccctttgt
gtgacaaaggtactttccaatggtttgcaagttacatttggaaaagataacattggatac
ataaatcaaatatatctaaacaatcctctgtccatgtatacagaaaatatggaagtgact
ggtatattattatatatattaccaactgtaaaattggcttactttagtctactaactgac
gaatcggaaaaggagagattaagtaaaggcgatattatacgaaaggccaaagttttatac
agggaatccaatgggataattttaaacatatccaaatctggactacatggttttgtttct
ttactaaaaaccaatgtcccgtttgccaaaattccaaccgaatttaagcaaggttctaca
cataagtgcaggatactcgcgtacaactggatagaacatctttatgtctgtacaatggag
gataaaattttaaaacagaaatacttttcagcttctgatcttaactgcggcgatattatt
actgtaaccattacagatattgatacaagtaatggctatatacatgtacaagcaggaaat
atttcgggatttgttccaccgatacacgtatccgatagtggtttaagtgcattaaataaa
ttgaaaatcggagatagcatcgaagcaagagtcttgcatctcaaaacttctagttacaac
acgaatgtaatgtttacactgaaacaatcgctaataaaaagcaaactaccagttttacat
gatattcatgatgcacaatgtggatcaaaataccatggtacaatcactaaaatagataag
aatggtttgttggtgagattttatggagctataaaaggatgggtaccacgcagtgcatta
aacggcgacacatataatatgaattggaattactccattggtcaaactcttactgtatgc
actgagtctatagaaaagaatgaaaataaaatgaaactaaaggttgttactgaagaacaa
aaacagcaggctgtgagattttctattggagaaatgatcgaaggaacagttactgaatcg
tccatcaagggagtatacttgagaatacatggagatgatgaaaacgtcacgacaggcttc
ttaccagcgggtcatatggctccatgtatcgaaatcggcagtttattggcatcaagatgc
actcccggagatgtaatttcagctttagttttcgctacaaagccaggtataatactatcg
cgtacttttgtgacacaagaacaatataggagctttgatttgttaaaagtaggcgattgc
attccatgtacaatcagagatatatcgcaagacggggtgagagttgtcttacctattgaa
aattactcgaaattgggatttgtatcatataagaacattaacaattttgagctattgcat
gtaaatcaaatattattcgtgaaaatcacggctatcaatatgcgagagaaatacttaact
ctgacaatggcgttgaaagatgtatgggatagtccgctggagaaggaagttaaaatgatg
acagcagtggatgttttgagtttgtacctcaacagattatcggaactagcaaagaataca
ttttacgacaacaaacccatttcattggcagtcttgggtcaaaaaattactggcactgta
gagaagattaccaaacacggtcttgtgctacgattagataatcatttgacgggtacagta
cgcaaagatcattattccggcgagtttcgagtcggggacaaggtatctggtacaatcttg
tggaagaattacgtccacgaactcgttgatgtatcattattaccgagaataataaatggc
attagttcgaaacaaaaaacactaccagaacttcccactggagtcgtgctgagagctgaa
attttaatgattaccaagtggttgatactcgttctgataaaacgcaatggcgcaggatat
ttggcagtgttacccgtccgccgacaccttaatgacatatctcccgatttaacgccttac
atgatacatgctaggattcgattgtatgttataatgactggaaatgaatctgatattgtt
cctgtctgtatgctaaagtctgcatttgaaacaaaaatctcaaaagaagcaactgtaact
acgaagaaaaaattaaaaagaaagaaaatatccgaacaacacaatgtaacacttacaaat
ccaacggaacaagcatcagagaaagataataagaaagaatatgaagttgaaatcaaagag
gaggaaactagaataaaggatatagatgaatattctgaattgagcaaagattcatccgat
gagagtgagaaaggtgaagataaaccaattgcggataaattacatattcaagaatgtgga
ttttcctgggacgataaagcaaacttagctacttccgctgaaacatctagcgatgatgaa
gaggaacctgaggaggaacctaagcgaaaaaagaaattaagcgcagctgagcgtcgagag
caggaacgcgagaaagaacgcaagatccgtcagcgagaggaagctttggcgagtaataaa
atgcccaactcgacggatcaattcgataaattagttttatcgaatcccgacagttcctta
gtgtggttacaatatatggcgtatcatttgcaagctacagaaatcgataaagcgagagcg
atcgcgaaacgagctatcaaaacgatcaattttagagaagaaaacgaacggctaaacgta
tggaacgcttggctaaatttagagtctagattcggtactttggaatctttgaacaatgtg
ttccaggaagctgtgcaaaccaatgacgcattcagaatatatacacacatgttgactgta
catgcggatgctggtaaaaagatcgagttagaaaaattgatcgacaccatgattggcaag
ttcaaacaaaatcctcaaacgtggataaactgcggtgctgcgttattgaaaattggtctg
aaagaaaaatcgcgacacattatgcaacgggcagtgcaatcgttgcctgcgtctcaacat
gtgaatttgttggtaagatttgcgaatttggagaataaattgggagataaggaacgagca
cagacattattcgagcacatcctgagttcttatccgaaacgtgtcgatgtatggtcatgt
tacgtagactgcttaataaaatccgaagacattgatatagctaggagagtattggaacga
gcctgtgttcaaacacttccagcaagaaaaatgaagactttatttacaaagtttaaaagt
tttgaggaaaagtatggcacgcccgaagccgtggcacgtatagtacaaatggctgctgag
tatgtcgagaaacaatgtaatatataa
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