Formica exsecta (narrow-headed ant): 115238200
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Entry
115238200 CDS
T07422
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115238200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115238200
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115238200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115238200
NCBI-ProteinID:
XP_029667663
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MTNFNNAPEMDLQYKTIHPVKYLQDHLEQGSRPDGRKFLSFRPVSINVSSIIQADSSAIF
KLGDTSAVCGIKAELAIPRADIPDHGYLVPNIELSPLCSSKFRPGPPSEQAQVLSKSIDI
ILSNSRALDLKDLCICKNKLVWVLYCDILCLNFNGSVIDACIGAVIAALKTLTLPEVNYN
NETGIIVVHPENRKAFPVRTFPVSASFAIFEKQLLLADPSDDEEVLSSARFFIVMDDEEE
ICYIHKPGGIAISQNLLCKGLEMTKIRAKLVRSVINAAISTLNINNIEINL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattttaataacgcgccagagatggatttacaatacaaaacgattcatcctgtg
aaatatttacaagatcatcttgaacaaggcagtcggccggacggtagaaaattcttatcg
tttaggccggtaagcataaatgtttcatcgattattcaagcagacagttcagcgatattt
aagttgggtgacacaagtgcagtttgtggtattaaagctgaattagcaataccaagagca
gatattccagatcatggttatttagtaccaaatatagaattatctcctctgtgttcttca
aagtttcgtccaggcccaccgagcgaacaagcgcaagtgctttctaaatcgatagatatt
atattaagcaattcgagagcgcttgatttaaaagatctttgcatctgcaaaaataaatta
gtatgggtcttgtactgcgatatcttatgtctaaatttcaatggctcagttatagatgct
tgtattggagcagtgattgcagctcttaaaacgttgaccttacctgaagtaaactacaac
aatgaaacaggaataattgttgtacatccagaaaatagaaaagcatttcctgtaagaaca
tttccagtttctgcatcatttgcaatatttgaaaaacaactgttgctagccgatccttca
gatgatgaagaagtcttgtcatcggcaagattttttattgtgatggatgatgaagaagaa
atttgttatatacataaacctggtggaattgctatctcccagaatttactttgcaaagga
ctagaaatgacaaaaataagagcaaaattagtcagatcggtaatcaatgctgcaatctcg
acactaaacataaataatatagaaataaatttataa
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