Formica exsecta (narrow-headed ant): 115238284
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Entry
115238284 CDS
T07422
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fex03009
]
115238284
Enzymes [BR:
fex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
115238284
Ribosome biogenesis [BR:
fex03009
]
Eukaryotic type
Other ribosome biogenesis factors
115238284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
Fibrillarin
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
115238284
NCBI-ProteinID:
XP_029667829
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MSTGFVHSVKVPRIYKFTADIVRRVQEDGASLKTLIYEKNHSNIAGIYGLSMNTLRMLPH
LDQLFHKTHILTEQPRLDPWLASVLITELLWGKKCLKSHSKPVLTVLAYEKKLQEELKNL
NYIETFISHKEKVQKPRYVRVNTLLLSVEKAISFFQKEGWQLLCRSTTYSSYLQTLSQLS
ESYFIQDFHIPEVLAFPPLTSFHEHSGYQNGELILQDKASCLPAHLLNPVSGSTVLDMCA
APGMKATHIAAKLQNNGEVYAVEIDVKRFETLFRQIRTTHSFCVKPLNQDVLTLDPKQYS
HVEYILVDPSCSGSGIVDRPEQSNINNKSLSKRLQNLQSFQAYLLRYALLNFPNAKRIIY
STCSLYPEENEEVIDEVLADIGNAYCLVPAQQLLKNNWINFSSKRYNCGDKCLYSKPNLD
FCNGFFVAVFERNFDVALPECKRKGGNVNSTIANLDIKKIDMVKKVECTQKQREKGIKKR
KGEISTNDGQVKISRNVVEFVVSQVENKIENEIKTKRNKKDIGKIDNCSLSNFNQEEIIL
NRPENIQIKISEDMKQKKSGKKRKSKKEKIICDK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggattcgtacattctgttaaggttccacgtatttataaattcacggccgat
attgtacgccgcgtgcaagaggatggtgccagtctaaaaactttaatttacgagaagaat
cattccaacatagccggcatatatggtctctcaatgaataccttgcgaatgctgcctcac
ttagatcaactcttccacaagacccacattctcacagagcaaccgcgtttggatccctgg
ctagctagtgttctcataacagagcttctatggggcaaaaaatgcctaaagagtcactcc
aaaccagttttaactgtgctagcttatgagaagaagttgcaagaagagttgaaaaacctc
aactacatagaaactttcatctctcataaagaaaaagtgcaaaagcctcgatacgtccgt
gtcaacactcttttattatcagtggagaaagccatctccttcttccaaaaagagggatgg
cagttattatgcaggagtacaacatattcctcatatctgcaaaccttatcacaattatcg
gaatcctactttatacaagattttcatataccggaagtgcttgcttttccgcccttgaca
tcctttcatgaacattccggctatcaaaatggtgaactcattcttcaagataaggctagc
tgcttgccagcacacttgttgaatcctgttagtggttccacagtactggatatgtgtgcg
gcacctggcatgaaggctactcatatagcagcaaaactacagaataatggggaggtttat
gctgtggaaatcgatgttaagagatttgaaaccttattcaggcagataaggacaactcat
tccttctgtgtgaaacctcttaatcaagatgttttaactctcgatccgaaacagtattca
catgtggaatatatcctggtcgatccaagttgttctggatcaggtattgtggacagacca
gaacaaagcaatataaacaacaagtctttgtcaaagcgcctgcaaaatctacaatcgttt
caagcttaccttcttagatacgcgctccttaattttccgaatgcaaaaagaataatctat
agcacctgttctctttatcctgaagagaatgaagaagtgatagacgaagttctcgctgat
attggcaatgcttattgcctggtaccagctcaacagttgctgaaaaataattggataaat
tttagttccaaaagatacaattgcggggataaatgtttgtattcgaagccaaatcttgat
ttttgcaacggtttttttgtggcagtatttgaaagaaacttcgacgtggctttgccagaa
tgcaaacgcaaaggaggtaatgtaaattctactatagctaacttagatataaaaaaaatt
gatatggtgaagaaagttgaatgcacgcaaaaacagcgtgaaaaaggaataaagaagagg
aaaggagaaatctcaacgaatgatggacaagtgaagatatcaaggaatgttgttgaattt
gtcgtatcacaagtagaaaacaaaatagaaaatgaaataaagacaaaaagaaataaaaaa
gacataggaaaaattgataattgttctttatcaaattttaatcaggaagaaataatattg
aataggccagaaaacattcagataaagatatcagaagatatgaagcaaaaaaaatcaggc
aagaagagaaaatcgaagaaagagaagatcatatgtgataaatag
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