Formica exsecta (narrow-headed ant): 115238847
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Entry
115238847 CDS
T07422
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115238847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fex03021
]
115238847
03041 Spliceosome [BR:
fex03041
]
115238847
03036 Chromosome and associated proteins [BR:
fex03036
]
115238847
Transcription machinery [BR:
fex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115238847
Spliceosome [BR:
fex03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
115238847
Complex B
115238847
Complex C
U2 SnRNP specific factors
115238847
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
115238847
TFTC complex
115238847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
115238847
NCBI-ProteinID:
XP_029668824
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGATKDYIVVGSDSGRIVILEYIPAKNMFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFDNP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDADNSEDSAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHADSAHLVVIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEAVFGAPRAGPGLWASLLRIMAPTTGQTFEVHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNTECTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKYGNIAVIRLATGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPVKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaatttgactctacaacgcgccaccggcatcacgcacgcggtgcatggc
aatttctccggcagcaagatgcaggagattcttgtctcccgcggcaaatcgttggagttg
ctgcgaccggatccgaacacaggaaaggttcacactctgctgactgttgaagttttcggc
attatcagatctctgatggcatttagattgaccggtgcaacgaaagattatattgtcgtg
ggttcggattccgggcgcatagtaattttagaatatattcccgccaagaatatgttcgac
aaagtacatcaggagacctttggcaaaagtggttgtagacgcatcgtacctggccagtat
ctagccattgatccaaaagggagagcagttatgataggtgctattgaaaaacagaagctc
gtatacatcctcaacagagacgccgaggcccgtttgacgatttcctctccattggaagct
cataaaagcaacacattggtatatcacacggtcggtgtcgatgttggtttcgataatccc
atgtttgcgtgtctagagatcgattacgaggaagccgacagcgatcccacgggcgatgcg
gcagtgaagacccagcaaactctgacactgtacgaacttgatctcggtctaaatcacgtg
gtgcgaaagtacagcgagccgctggaggagcacgctaacttccttgtatccgtgccgggc
ggcaatgacggtccgagcggtgtgctaatctgctccgagaattatctcacctacaaaaac
ctcggtgatcagcacgatattcgttgcccgatcccgcgacgccgcaacgacttggacgat
cccgagagaggaatgatattcgtgtgctcggccacgcacaagacgaaaagcatgtttttt
tttctggcgcagacggaacagggagacattttcaaaatcacactcgagacagatgaggac
atggttaccgaaatcaagctcaagtacttcgatacggtacccgtcgcagcgagtatgtgt
gttctcaaaacgggtttcctgtttgtcgcctcggaattcggcaaccattacctgtatcaa
atagcgcatttgggcgacgacgacgatgagcccgaattcagttcagcgatgccgctcgag
gaaggcgacaccttcttcttcgcaccacggccacttcgtaatctggtactagttgatgaa
atggatagtctttcgcccataatggcttgccaggtggcagatctggcaaacgaggatacg
ccacaattgtacattgcctgcggtcgagggccgcgatctaccctgcgcgtgctacgccac
ggtctcgaggtttctgagatggccgtgagtgagttgcctggtaatccaaacgccgtatgg
actgtgaaaaggagaatcgatgaggaatatgatgcatacatcatagtgtccttcgtgaat
gccacacttgtactcagtattggcgagactgtcgaggaagtgacggattcgggtttcctc
ggtacaacaccaaccttgagttgttcagcgttaggcgaggacgcattggtgcaggtgtat
cctgacggtatacgccatatacgagcagataaacgtgtcaatgaatggaaggcacctggt
aagaagaccatcgtaaaatgtgcggttaatcaacgtcaagttgtaatcgctcttactgga
ggggaactcgtctacttcgaaatggatcccactggacaattgaatgaatatacggagaga
aagaagatgccgtcggaagtgatgtgcatggccctcggaaatgttgccgtgggcgaacaa
cgctcgtggtttctggccgtcggcctgcaggacaatacagtgagaataatatcgttggat
ccctcggactgtctagcgccgagaagtatgcaggccttaccggcggctgcagagagtcta
tgtatcgtagaaatgggtgccaaggacgccgacaattccgaggattcggcgccacaacaa
tccagtttatatttaaacataggtttacagaatggcgtattgctcagaactgtgttagat
ccgatttccggcgatcttgcggacacgagaacacgctacctgggctcccgccccgtcaag
ctcttcagaatacgtatgcagggcaatcaagctgtactggcgatgagcagtcgatcgtgg
ctgagttactatcatcagaatcgttttcatctcacgcccctgtcgtacgaaagtctcgaa
tttgcatctggctttagttccgagcagtgcccggaaggtatagttgccatatcgacgaac
acattgaggattctggcgctcgagaaacttggcgccgtgttcaatcaagtgagctttcca
ctggaatatacaccgcggaagttcgcgattcacgccgattccgcgcatctggtagttatc
gagaccgagcacaacgcttacacggaagagacgaagcaacagaggagactacagatggcg
gaggagatgcaagaagcggccggcgccgaggaggctgccgtcgcccgggaattggcggag
gcgttcctatcggaggagccgaatgaggctgttttcggtgccccgcgagcgggaccaggc
ttatgggcctcgctgctgagaataatggcaccgactaccggccaaacgttcgaagtgcat
cgtttcgagcaaaatctagctgcattatgtctctgtctcgtgaagtttgccaatcaagga
gatcaattgttcctcatcgtcggagttgcaaaggagtttcaattaaatcccagggttagc
aacggcggttttctttacacatacaaagtaaatacggagtgtaccagtatcgagctgctg
cacaaatctccgttggacgaagtaccgctggccatttgtccgtatcagggcagagtactg
gtcggcgtgggtaggatgctgcggctttacgacatgggtaagaagaagttactgcgcaaa
tgcgagaacaagcacatacccaacgccgtggtctcgatcaatgccatcggtcaacggatt
tacgttagcgatgtacaggagtctgtatacgccgtgaggtacaaacgccaggaaaatcaa
ttgatcgttttcgcggatgatacacatcccagatggatcacaactacatgcgtgttggat
tacgatactgttgccaccgctgataaatacggaaacatagctgtgatacggttggcgacc
ggcattaacgacgatgtggacgaggatcctacggggaacaaggctctgtgggaccgagga
ttgctgaatggcgccagccagaaagcggacacggtggcttgctttcacgtaggcgagacg
gtgatgtcgctgcagaaggcgacccttatacccggaggttccgagagcttggtttacacg
acccttagcggaacggtgggcgtccttgtgccgttcaccagtcacgaggatcacgatttc
tttcagcatttggagatgcacatgcgatccgagcacccgcctttatgcggtagggatcac
ctgtctttccggtcgtactattacccagtgaagaatgtcatcgacggcgatctctgcgag
caattcaattcgattgaacccgttaagcagaagagcatctctggcgatctcgagagaaca
ccgtccgaggtgtcgaagaaactggaggacatacgtacgcgatacgcgttctaa
DBGET
integrated database retrieval system