KEGG   Formica exsecta (narrow-headed ant): 115238847
Entry
115238847         CDS       T07422                                 
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
fex  Formica exsecta (narrow-headed ant)
Pathway
fex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115238847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fex03021]
    115238847
   03041 Spliceosome [BR:fex03041]
    115238847
   03036 Chromosome and associated proteins [BR:fex03036]
    115238847
Transcription machinery [BR:fex03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     115238847
Spliceosome [BR:fex03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115238847
 Complex B
    115238847
 Complex C
   U2 SnRNP specific factors
    115238847
Chromosome and associated proteins [BR:fex03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     115238847
    TFTC complex
     115238847
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_VPS8
Other DBs
NCBI-GeneID: 115238847
NCBI-ProteinID: XP_029668824
LinkDB
Position
Unknown
AA seq 1217 aa
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGATKDYIVVGSDSGRIVILEYIPAKNMFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFDNP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDADNSEDSAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHADSAHLVVIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEAVFGAPRAGPGLWASLLRIMAPTTGQTFEVHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNTECTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKYGNIAVIRLATGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPVKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtatttgtacaatttgactctacaacgcgccaccggcatcacgcacgcggtgcatggc
aatttctccggcagcaagatgcaggagattcttgtctcccgcggcaaatcgttggagttg
ctgcgaccggatccgaacacaggaaaggttcacactctgctgactgttgaagttttcggc
attatcagatctctgatggcatttagattgaccggtgcaacgaaagattatattgtcgtg
ggttcggattccgggcgcatagtaattttagaatatattcccgccaagaatatgttcgac
aaagtacatcaggagacctttggcaaaagtggttgtagacgcatcgtacctggccagtat
ctagccattgatccaaaagggagagcagttatgataggtgctattgaaaaacagaagctc
gtatacatcctcaacagagacgccgaggcccgtttgacgatttcctctccattggaagct
cataaaagcaacacattggtatatcacacggtcggtgtcgatgttggtttcgataatccc
atgtttgcgtgtctagagatcgattacgaggaagccgacagcgatcccacgggcgatgcg
gcagtgaagacccagcaaactctgacactgtacgaacttgatctcggtctaaatcacgtg
gtgcgaaagtacagcgagccgctggaggagcacgctaacttccttgtatccgtgccgggc
ggcaatgacggtccgagcggtgtgctaatctgctccgagaattatctcacctacaaaaac
ctcggtgatcagcacgatattcgttgcccgatcccgcgacgccgcaacgacttggacgat
cccgagagaggaatgatattcgtgtgctcggccacgcacaagacgaaaagcatgtttttt
tttctggcgcagacggaacagggagacattttcaaaatcacactcgagacagatgaggac
atggttaccgaaatcaagctcaagtacttcgatacggtacccgtcgcagcgagtatgtgt
gttctcaaaacgggtttcctgtttgtcgcctcggaattcggcaaccattacctgtatcaa
atagcgcatttgggcgacgacgacgatgagcccgaattcagttcagcgatgccgctcgag
gaaggcgacaccttcttcttcgcaccacggccacttcgtaatctggtactagttgatgaa
atggatagtctttcgcccataatggcttgccaggtggcagatctggcaaacgaggatacg
ccacaattgtacattgcctgcggtcgagggccgcgatctaccctgcgcgtgctacgccac
ggtctcgaggtttctgagatggccgtgagtgagttgcctggtaatccaaacgccgtatgg
actgtgaaaaggagaatcgatgaggaatatgatgcatacatcatagtgtccttcgtgaat
gccacacttgtactcagtattggcgagactgtcgaggaagtgacggattcgggtttcctc
ggtacaacaccaaccttgagttgttcagcgttaggcgaggacgcattggtgcaggtgtat
cctgacggtatacgccatatacgagcagataaacgtgtcaatgaatggaaggcacctggt
aagaagaccatcgtaaaatgtgcggttaatcaacgtcaagttgtaatcgctcttactgga
ggggaactcgtctacttcgaaatggatcccactggacaattgaatgaatatacggagaga
aagaagatgccgtcggaagtgatgtgcatggccctcggaaatgttgccgtgggcgaacaa
cgctcgtggtttctggccgtcggcctgcaggacaatacagtgagaataatatcgttggat
ccctcggactgtctagcgccgagaagtatgcaggccttaccggcggctgcagagagtcta
tgtatcgtagaaatgggtgccaaggacgccgacaattccgaggattcggcgccacaacaa
tccagtttatatttaaacataggtttacagaatggcgtattgctcagaactgtgttagat
ccgatttccggcgatcttgcggacacgagaacacgctacctgggctcccgccccgtcaag
ctcttcagaatacgtatgcagggcaatcaagctgtactggcgatgagcagtcgatcgtgg
ctgagttactatcatcagaatcgttttcatctcacgcccctgtcgtacgaaagtctcgaa
tttgcatctggctttagttccgagcagtgcccggaaggtatagttgccatatcgacgaac
acattgaggattctggcgctcgagaaacttggcgccgtgttcaatcaagtgagctttcca
ctggaatatacaccgcggaagttcgcgattcacgccgattccgcgcatctggtagttatc
gagaccgagcacaacgcttacacggaagagacgaagcaacagaggagactacagatggcg
gaggagatgcaagaagcggccggcgccgaggaggctgccgtcgcccgggaattggcggag
gcgttcctatcggaggagccgaatgaggctgttttcggtgccccgcgagcgggaccaggc
ttatgggcctcgctgctgagaataatggcaccgactaccggccaaacgttcgaagtgcat
cgtttcgagcaaaatctagctgcattatgtctctgtctcgtgaagtttgccaatcaagga
gatcaattgttcctcatcgtcggagttgcaaaggagtttcaattaaatcccagggttagc
aacggcggttttctttacacatacaaagtaaatacggagtgtaccagtatcgagctgctg
cacaaatctccgttggacgaagtaccgctggccatttgtccgtatcagggcagagtactg
gtcggcgtgggtaggatgctgcggctttacgacatgggtaagaagaagttactgcgcaaa
tgcgagaacaagcacatacccaacgccgtggtctcgatcaatgccatcggtcaacggatt
tacgttagcgatgtacaggagtctgtatacgccgtgaggtacaaacgccaggaaaatcaa
ttgatcgttttcgcggatgatacacatcccagatggatcacaactacatgcgtgttggat
tacgatactgttgccaccgctgataaatacggaaacatagctgtgatacggttggcgacc
ggcattaacgacgatgtggacgaggatcctacggggaacaaggctctgtgggaccgagga
ttgctgaatggcgccagccagaaagcggacacggtggcttgctttcacgtaggcgagacg
gtgatgtcgctgcagaaggcgacccttatacccggaggttccgagagcttggtttacacg
acccttagcggaacggtgggcgtccttgtgccgttcaccagtcacgaggatcacgatttc
tttcagcatttggagatgcacatgcgatccgagcacccgcctttatgcggtagggatcac
ctgtctttccggtcgtactattacccagtgaagaatgtcatcgacggcgatctctgcgag
caattcaattcgattgaacccgttaagcagaagagcatctctggcgatctcgagagaaca
ccgtccgaggtgtcgaagaaactggaggacatacgtacgcgatacgcgttctaa

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