Formica exsecta (narrow-headed ant): 115238877
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Entry
115238877 CDS
T07422
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115238877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115238877
Enzymes [BR:
fex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
115238877
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115238877
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115238877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
115238877
NCBI-ProteinID:
XP_029668879
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSRNHKDKYENSNPRRIYTLMCSEDYQSGKKSHWSELEITGSIRNLSPNLWQMIHLTALY
LNDNSLQRVPAEIGRLVNLRILDLSSNKLNSLLXNFLYYFRELLLNQNYLRVLPYELGKL
FQLQVLGLQGNPLSKDVLTLYGTGEPAGTNKLLTYMLDNLQVTANHPPQRPWIPLTRPNR
TRPTCIFTVMCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQEVE
TDQFYNFFLPELKHDGYDGIFSPKSRAKTMAENDRKYVDGCAIFYRTAKFSLIKEHLVEF
NQLAMANAEGSDNMLNRVMPKDNIGLAALLRTKEAAWDNGVPSDPAQVQQPILVCTAHIH
WDPEFCDVKLIQTMMLSNELRSILDQAGQSFRPGHKPDSSNVQLLLCGDFNSLPDSGVIE
FLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTFEFK
GIIDYIFYSKQSMVPLGLLGPLSPEWFKEHKVVGCPHPHVPSDHFPLLVELEMTPTVGTS
NGLISRR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaatcataaggacaagtatgagaactccaacccacgtcgtatttacacactc
atgtgctctgaggactatcaatcggggaagaaatctcattggtcggagttggagataaca
ggcagtataagaaacttaagccccaacttgtggcaaatgattcatctgacagctttgtat
ctgaacgacaatagtctgcagagagtaccagctgaaattggtcgtcttgtcaacttgcgc
attttagatctcagcagcaataaattaaattctttattgtaaaatttcttatattatttc
agggagttgttattgaaccaaaactaccttcgcgtgttaccgtacgaactagggaagttg
ttccaattacaagtgcttggacttcaaggaaatccactcagcaaggatgtattgacgtta
tatgggactggggagcctgcagggacaaacaagctgctgacatacatgttggacaactta
caagttacagcaaaccatccgccccaaagaccgtggattccgttgacaaggcccaacagg
acgagaccaacatgcatatttacggtgatgtgttacaacgtgctttgcgacaagtacgcg
acacggcagatgtacggctattgtccgagctgggcgctggactgggagtatcggaagaag
ggtatcctcgacgagatacggcattacgccgcggacatcatcagcctgcaagaggtcgag
acggaccaattctacaatttcttcttgccggagcttaaacacgacggctacgacggcata
ttctcgcccaagtcccgcgcgaaaacgatggcggaaaacgaccgcaagtacgtcgacggc
tgcgccattttttataggaccgccaagttttctctgataaaggagcatttagttgaattc
aatcaattggcgatggcgaacgcggagggttcggacaacatgttgaatcgagtcatgccc
aaagataacataggactggctgcattacttaggactaaggaagccgcttgggataatggt
gttccatctgatccagcacaagtgcaacaaccaattttagtttgtacggcgcacatccat
tgggatcccgaattttgcgatgtaaaattgatacagacgatgatgttgagcaatgaatta
cgttccattttggaccaagctggccagtcattcagacccggccataagcctgactcttcc
aatgttcaactgctactttgtggcgactttaattccttacctgattctggtgtgatcgaa
tttcttacatccggacgtgtagcagccgatcatcgtgattttaaggatttagcgtacaaa
tcgtgtttacaaaagatctctggctgcgataaacctaacgagttcacgcattctttcaag
cttgcatctgcctatagcgaggacattatgccctacaccaactatacatttgaatttaaa
ggcataatagactacattttctattcgaagcaaagtatggtgccactaggcctcctaggt
ccattgagcccagagtggtttaaagagcataaagtagtaggatgtcctcatcctcatgtc
ccatctgatcactttcctctgttagtggagttggaaatgacaccgacagtaggaacaagt
aatggtttgatctcacgcaggtag
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