KEGG   Formica exsecta (narrow-headed ant): 115239097
Entry
115239097         CDS       T07422                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
fex  Formica exsecta (narrow-headed ant)
Pathway
fex03013  Nucleocytoplasmic transport
fex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115239097
  09122 Translation
   03013 Nucleocytoplasmic transport
    115239097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fex03019]
    115239097
   03041 Spliceosome [BR:fex03041]
    115239097
Messenger RNA biogenesis [BR:fex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     115239097
Spliceosome [BR:fex03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    115239097
SSDB
Motif
Pfam: Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40 WDR55 Beta-prop_NOL10_N Beta-prop_TEP1_2nd Beta-prop_WDR41 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_ACSF4 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_EML DSE1_N EIF3I Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th UCP007778 Beta-prop_DCAF4 WD40_like Beta-prop_Vps41 Beta-prop_NUP159_NUP214 ASA1 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 115239097
NCBI-ProteinID: XP_029669297
LinkDB
Position
Unknown
AA seq 331 aa
MIETSDRKLLYNTVLSQTFSPNGNYLLAGNIYGDVSIFDLSKTLGPNKIEENELQGPNYR
FAAHPEQEIACMLSIENFLVTGTRGEISGWDWKTITSNKSPKSKASWNIQIPANKDSYDK
PDINYMAYSKANHLLYAGCGDNNIYIINLDDGRILRSMQGHTDYIHCLAIMDNQLASCSE
DGSVRLWDLRKKENTSILTPHLVDKVARPRLGKWIGAVDFTEDWLLCGGGPSLSLWHMRT
MEAATIFDLADQGIHVAEIYEERVIAGGAAAHVYHMTYQGEILAKVPTSSLTVYSIVHQE
TPHKLLCAAGSSNCIDISTNFNYREMMLKFA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgatagaaacttcagacaggaaattactttataatactgtattatcacaaacgttttct
cccaatggaaattatcttctggctggcaatatttatggagacgtgtcaatatttgattta
tcaaagaccttaggtcccaacaagatagaggagaatgaattacaaggacctaattatcgt
tttgccgcgcatccagaacaggaaatagcgtgtatgctctccatcgagaatttccttgta
acaggaacacgtggtgaaatatcaggatgggattggaagacaattacctcgaataaaagt
cctaagagtaaagcttcttggaacatacaaattcctgctaataaggatagttatgataaa
ccagatataaattacatggcatactcaaaagcaaatcatttactgtacgctggttgtggc
gataataacatatatattataaacttggatgacggaagaattttgagaagcatgcaaggc
cacactgattatatacactgccttgctataatggataatcagcttgcatcctgcagtgag
gatggttctgtgagattatgggatttgcgtaagaaggagaatactagcatattaacgccc
catttagtagataaagttgctcgaccgcgacttggaaaatggatcggtgctgttgatttt
acagaagattggttgctatgtggcggtgggcctagtctatcgttatggcatatgcgaacg
atggaggcagcgacaatttttgatttggctgatcaagggatacatgtggcggagatctac
gaggaacgcgtgattgccggtggtgcggccgctcatgtttatcacatgacttaccagggt
gaaatcctggccaaagtaccaacctcgagtctcactgtatatagtatagtacatcaagaa
acaccacataagttgctctgtgcagctggttcttcgaattgtatcgatatcagtacgaat
ttcaattatcgcgaaatgatgcttaaatttgcgtaa

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