Formica exsecta (narrow-headed ant): 115239097
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Entry
115239097 CDS
T07422
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03013
Nucleocytoplasmic transport
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115239097
09122 Translation
03013 Nucleocytoplasmic transport
115239097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115239097
03041 Spliceosome [BR:
fex03041
]
115239097
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115239097
Spliceosome [BR:
fex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115239097
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WDR55
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
Beta-prop_WDR41
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
DSE1_N
EIF3I
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
UCP007778
Beta-prop_DCAF4
WD40_like
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
ASA1
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
115239097
NCBI-ProteinID:
XP_029669297
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MIETSDRKLLYNTVLSQTFSPNGNYLLAGNIYGDVSIFDLSKTLGPNKIEENELQGPNYR
FAAHPEQEIACMLSIENFLVTGTRGEISGWDWKTITSNKSPKSKASWNIQIPANKDSYDK
PDINYMAYSKANHLLYAGCGDNNIYIINLDDGRILRSMQGHTDYIHCLAIMDNQLASCSE
DGSVRLWDLRKKENTSILTPHLVDKVARPRLGKWIGAVDFTEDWLLCGGGPSLSLWHMRT
MEAATIFDLADQGIHVAEIYEERVIAGGAAAHVYHMTYQGEILAKVPTSSLTVYSIVHQE
TPHKLLCAAGSSNCIDISTNFNYREMMLKFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaacttcagacaggaaattactttataatactgtattatcacaaacgttttct
cccaatggaaattatcttctggctggcaatatttatggagacgtgtcaatatttgattta
tcaaagaccttaggtcccaacaagatagaggagaatgaattacaaggacctaattatcgt
tttgccgcgcatccagaacaggaaatagcgtgtatgctctccatcgagaatttccttgta
acaggaacacgtggtgaaatatcaggatgggattggaagacaattacctcgaataaaagt
cctaagagtaaagcttcttggaacatacaaattcctgctaataaggatagttatgataaa
ccagatataaattacatggcatactcaaaagcaaatcatttactgtacgctggttgtggc
gataataacatatatattataaacttggatgacggaagaattttgagaagcatgcaaggc
cacactgattatatacactgccttgctataatggataatcagcttgcatcctgcagtgag
gatggttctgtgagattatgggatttgcgtaagaaggagaatactagcatattaacgccc
catttagtagataaagttgctcgaccgcgacttggaaaatggatcggtgctgttgatttt
acagaagattggttgctatgtggcggtgggcctagtctatcgttatggcatatgcgaacg
atggaggcagcgacaatttttgatttggctgatcaagggatacatgtggcggagatctac
gaggaacgcgtgattgccggtggtgcggccgctcatgtttatcacatgacttaccagggt
gaaatcctggccaaagtaccaacctcgagtctcactgtatatagtatagtacatcaagaa
acaccacataagttgctctgtgcagctggttcttcgaattgtatcgatatcagtacgaat
ttcaattatcgcgaaatgatgcttaaatttgcgtaa
DBGET
integrated database retrieval system