Formica exsecta (narrow-headed ant): 115239205
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Entry
115239205 CDS
T07422
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fex03000
]
115239205
Transcription factors [BR:
fex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115239205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
TFIIA
CSRNP_N
DDHD
Motif
Other DBs
NCBI-GeneID:
115239205
NCBI-ProteinID:
XP_029669458
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MLTMETDMKGGNLHAQMPPHPHQGVSPMGHHTGMSPYGSLGSIVHSPALSGSPPSAGGLS
LGLQHHHQTSQHHYSSMAAAAAVQQQQQNMHAMAAQQSAQQQQQQQHHSHQQQQQSQSQQ
HHQPNNHSNPNNPNNPSNSANAKNNNMDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI
SKRLGAEWKLLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKEKFPLAGGV
TGVGGMLVDQRQVVTSGGPQQPQLSRDVYQMSNGYMPNGYMMHDPTAAYQQHVAYGGHMG
NAAAAAAASAAAYPRYDPMSHHMGGGSPSPINNYMNGYGGYGATTVPGGSPSPYHQAQPG
SQMSSHSPSGSSIKSEPTSPASGGIHTPTPTAGPTSTSAAAVANQAVKREYMGQQQASQQ
TSQGDHLRHMISMYLPHGPDQPGAGVYSPGPSPDSLQHHAIQPLSHMH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagacggacatgaagggcggcaatctgcacgctcagatgccaccgcat
ccgcaccagggcgtatcgccgatgggtcaccacacggggatgtctccttacggtagtctc
ggctcgatagttcacagcccggcgctatcgggaagtccgcccagcgcgggcggtctgagt
cttggtcttcagcatcatcatcagacatctcagcatcattatagttcgatggcagccgcc
gccgctgttcagcaacagcagcaaaacatgcacgcaatggcagcgcaacagagtgctcag
cagcagcagcaacagcagcaccattctcatcaacaacagcaacaatcgcaatcgcaacag
catcatcagcctaataatcatagcaatcctaataatcccaacaaccctagcaactctgcc
aacgccaagaacaacaatatggaccgcgtgaagaggccgatgaacgcctttatggtatgg
tcgcgcggtcagcggcgcaagatggctcaagaaaatccgaaaatgcataactctgagatc
tcgaaacgcctcggcgccgaatggaaactccttagcgagtcggaaaagcgtccgtttatc
gatgaggcgaagcgattgcgcgcagttcatatgaaggagcatccggattacaaatatcga
ccacgacgcaagacaaagacgttactcaagaaggaaaagtttccgctcgctggcggcgtc
accggtgttggcggtatgctcgtcgatcagcgacaagttgtcaccagcggcgggccgcag
cagccgcaattgtcgcgtgatgtctatcaaatgtccaacggctacatgcctaacggttac
atgatgcacgacccaacagccgcgtaccagcaacacgtcgcatacggcggtcacatgggg
aacgctgcggcggccgctgcagcctcggctgctgcctaccccaggtacgaccctatgagc
catcacatgggcggcggtagtcccagccctatcaacaactacatgaacggatacggcgga
tacggcgctaccactgtgcccggcggctcgccgtcaccttatcaccaggctcaaccgggc
tctcagatgtcaagtcatagtccgagcggcagtagcataaaatccgaaccgacgagcccg
gcgagcggcggcatccacacgccgacgccgacggctggtccaacatcgacgagcgcggct
gcggtcgccaaccaggccgtcaagcgggaatacatgggccagcagcaagcgagccagcaa
acgtcgcagggcgaccacctcaggcacatgatctcgatgtatctaccacacggccccgat
cagcccggtgcgggcgtctactcgccgggaccatcgccggactctctgcagcatcacgcc
atacaaccgctctcacacatgcactag
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