Formica exsecta (narrow-headed ant): 115240010
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Entry
115240010 CDS
T07422
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115240010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115240010
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115240010
Spliceosome [BR:
fex03041
]
Complex A
U2 snRNP components
U2 related factors
115240010
Complex B
115240010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
115240010
NCBI-ProteinID:
XP_029670791
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSAEPEKKRRRSRSRERERDRDKGRHRERRSRSRDRDRE
RSDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDSEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWS
LEDDSDEETPVVQNNTKEAKEEGVKEEVEEVKEEVKDEEEEIDPLDAFMAEVQEEVRKVN
KFDSKAPKSANNGTNSGAQSVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLHE
TAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGK
GCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLA
FLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI
SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR
IMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQK
FYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDF
KAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITS
EQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESEA
ALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPTATNITVPGQPV
PSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAAK
LNTKLNYQPREEDLVESDAETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSE
AGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAHT
ASRGRYKVL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtagcgacaaggataggcatcatcggcgaagatccaggtcgagatcgaga
tctagatcggctgaacctgagaaaaaacgacggcgttccagaagcagggagcgagagagg
gacagggacaagggacgtcatagagaacggaggagtcgttcgcgagatagagatagagaa
aggagtgatagaagggaacgttccgagagggacagggatcgcgagagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcaaagtcttcgcgctctggcaaagaacgatcaaac
aggtctcggtcacgcgataggaaggataaagaaaagggcgacagcgaagagttgcctttt
gaccatacaaaactggacaaggaggaagaacaaaaaaggctagaattggaaatgcaaaag
agaagggaaaggatagagagatggcgtgcagaaaggaagaagaaagagctggaagcaacc
aaaaaagacggtaagacatctattttggcaaatcttcagctacccatgaaaaaatggtcc
cttgaggatgatagtgacgaagagactcctgtggtacagaataacaccaaggaagcaaaa
gaagaaggtgtaaaggaagaagttgaagaagtgaaggaagaagtaaaagatgaagaggag
gaaattgatccacttgatgcttttatggcagaggttcaagaagaagtgagaaaagttaat
aaatttgatagtaaagctccaaaaagtgccaacaatggcacaaattctggtgcgcagagt
gtggttattgtgactggtgtggctaagaaaaaagttcaaaaacaaaagggagaattgatt
gagcaaaatcaagatggtttggagtactccagtgaagaagaaggcgagaatcttcatgag
actgccgctggtatagcaaacaaacaaaagcgagaattagccaaagttgatcatgctaca
acagattatcaaccatttcgaaaatctttttacgtcgaagttcctgaaattgcaagaatg
acaccagaagaagtagaggcatacaaagaagaattagaaggtattcgtgtgaaaggtaaa
ggctgcccaaaacctatcaagtcttgggcgcaatgcggtgtgaccaagaaggaattagaa
gttttgaagaaacttggttacgagaaaccaacacccattcaatgccaggcaatcccggcc
attatgtctggtcgtgatctcataggtatagcaaaaactggtagcggaaagacgctagct
tttctgttacctatgtttcgtcacatacttgatcagccaccattagccgatggtgacgga
ccgattgcattgattatgacaccgactagagagttatgcatgcaaattggcagggactcg
aaaaaatttacaaaatcattgggcctttcgcatgtgtgcgtttatggaggcactggcatt
tctgaacaaatagcggagcttaaaagaggggccgagattatcgtatgtacaccgggaagg
atgatcgacatgctcgctgctaatagcgggcgtgtaaccaatttacgtcgcgtgacgtat
gtggtgctcgacgaggccgacaggatgttcgatatgggttttgaaccgcaagtaatgcgg
attatggaaaacgtgagaccagatagacagactgtgctgtttagcgcgacattcccgaga
cagatggaggcgctggccaggagaattcttacgagaccggtggaggtgcaggtcggtgga
cggtccgtagtttgtaaagatgttgagcagcatgtggttgtactcgaggaagaccaaaag
ttctataaattgcttgagattcttggacattatcaagacaaaggttctaccattatattt
gtggacaaacaagagaatgcagacacattgttgaaggatcttatgaaagcttcatattcc
tgcatgtctctccatggtggtatagatcaatgcgacagagattcgactatattggacttc
aaagccggacggacaaaattgctcgtggccacctccgttgccgctagaggcttagatgtc
aagcatttggtattagtcgttaattacgattgccctaatcattatgaagattacgtgcac
agatgtggtagaactggtcgggctggaaataaagggtacgcgtacacttttattacatca
gagcaagaacgttatgctggcgatattttacgtgcgcacgaattagcaggtgtacctgtt
ccagaacccttgcgtcagttatgggaaggttacaaggcacgtcaagctgcggatggaaag
aaagttcacaccggaggtggtttcagtggcaaagggttcaaattcgatgaatcagaagct
gctttagcaaatgagaaaaagaaattccaaaaagcagccttgggactgcaagattccgat
gatgaagacatagaaaatgatatcgatcaacagatcgagagtatgctggcacctaagcga
acagttcgcgaaatagctagaccaaccgcgactaatatcacggtacctggtcaaccggta
cctagcgcaaccgataaactggaattagccaggagattggcatcgaagataaatatcgct
aagaatctgggcgccgaggcgaagggcgccactcaacaagcggcggaagccatactcaaa
ggagcaggacctacgaatcttattacggcaaagacagtcgctgaacagctcgcggcaaaa
ttgaacactaaattaaattatcaaccacgcgaagaggatctggtggaaagcgacgcggaa
acgggtgaacaaacgttccgcaagtacgaagaagagctcgaaatcaatgacttcccacag
caagcgagatggcgagtcacgagcaaggaagctctagctcagatttcagaatattctgag
gcaggtcttacagttagaggaacatatattgcgcctggaaaaactccaccggagggcgaa
aggaaattatatctagcgattgaatctacgagcgagttagcagtcagcaaggccaaggca
gaagtgtctcggcttatcaaggaagaactcatcaagctacaggcgtctggcgctcacact
gcatcacgtggtcgatacaaagtcttataa
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integrated database retrieval system