Formica exsecta (narrow-headed ant): 115240200
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Entry
115240200 CDS
T07422
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115240200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fex03036
]
115240200
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115240200
REST complex
115240200
Heterochromatin formation proteins
Other heterochromatin formation proteins
115240200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
115240200
NCBI-ProteinID:
XP_029671046
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MKRIRGLDDVTSPPARHSTVSAGSGLGGGGGSLEYHTSSGIGVVVPGQAVRSVASKEMPG
SIQFGTAQAQQQYTGAIVVPTAAPSPIKQASGSTGGLSSTCSSSNINSSGLNSGLGSGNS
HTMASQQPASGSQNQVHTQQQSTIRHKVHTGNVTPLASTPPGSNQGGAGGGSQFQRLKVE
DALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFNT
FLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPAKA
PPVLQIMQGSGNIHHTLANSITTNSLTVHAPSPPPVPVYNNSHVSTAQAQAVSQALSQAD
GVSTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHM
GGTSSGATTGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSAMFQTNKT
TSINDHTAIVKKPIGLKTPYNNSGTISRDLRESSSTAGLERDNRDHRERERERDRSNVRD
INSGQKPGHSTGQLKRSPSFSTSATAGNSHHVQHGPPPLKKPKVASMRDVTIAEAGKYGT
LNDYAFFDKVRKSLRSQDVYENFLRCLVLFNQEIVSKSELVLLVTPFLGRYPELLRWFKD
FLGYLPADSSATTTANSGNAVGVETFPNSVVRSHQERPQNDLAIEIDYAACKRLGASYCA
LPKSYIQPKCGGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDERFELD
VVIETNASTIRVLEGVHKKMNRMSQEEAQKYKLDDCLGGSSPTIHQRAIKRIYGDKSHDI
IEGLKKNPQIAVPIVLRRLKAKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQND
VKALRSKSLFNEIETIYDERHEQGDDSNGDGQGNSGPHLILPYKDKSVLDDAANLLIHHV
KRQTGIHKEDKQRIKLLLKHFIPDLFFHTRQELSDDERDEDDEKDINVASCNNSQSSTTT
SSLSGLQANRNKASVSPNTSSTSAKNEADIKVPIHALSNDPEEAYTLYMASNNWYLFLRL
HHILCERLTKMYDRAVALAEEESKYKQQRKESTAIALRLKPKSEIEIEDYYPAFLDMVKN
VLDGNMESTAYEDTLREMFGIHAYIAFTLDKIVTYAVRQLQHLVTDTICQQCMELFQREQ
RQPKESSGAGGLCATAYMRLSAELAYQRKAEKTMVDENCFKIYIYKKDCKMTVELLDTEG
DETVDSGCREREREGVTVSEKWSTYVERFSAPAGQASPKDTPALTENEPPTNHPVSSDQA
ARGGRGRKRKNTDISKKMDGNSWSSLGRASAGRKPIFLYRNIKSYRKHAARLAKEKQSLL
NTNHPERVTDSVDAPDIINSDETQCRFNPNSYTMLFIVHKDRFLYKQKSINRARMSHPAV
TKRMDTKFHHWHASWISKNGTDTQHRLCQDWLMGRYENLIPHRTRVVTNNDQTRSPYRQY
NRFKVERLQSDLLTSEPCV
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtattcgtggactagacgacgtaacatcaccaccagcaaggcactcaacggtg
agtgcgggaagcggcttaggtggtggaggaggtagcttagaatatcatacaagcagtggg
ataggtgttgttgtacctggtcaagcagttcgatctgttgcttcgaaagaaatgccaggg
agtatacaatttggtactgcccaagctcaacagcaatataccggtgcaattgttgtgcca
acggcagcaccatctcccatcaaacaggcgagtggttctacgggaggacttagttctaca
tgtagcagtagcaacataaatagtagtggtttgaatagcggattaggtagcggcaatagt
cataccatggcttcccaacaacctgcatcaggatcacaaaatcaagtacatacgcaacag
caatcgacaataaggcataaggtgcatactggtaatgtaacaccactggcatccactcca
cctggctccaaccaaggaggagcaggaggaggatcccagttccagagattaaaagtggaa
gatgcgctatcttacctagatcaagtcaaatataaattcagtgatcaaccacaggtgtac
aatgatttcttggatatcatgaaggaatttaaatctcaaagtatagatactccgggcgtt
ataacccgagtgagtcatctattcaaaggacatcccgagcttattgttggtttcaataca
tttctcccaccaggctataaaatagaggtacaagcaaacgaacaaggatatgcctttcaa
gtgtctgtcagtatgcccagtccaacagcaacgcacacagctacgttatctcagcatcat
tgtacagtcaatgttggttcacctcctgtggctagcccacctacgcagcccgcaaaagca
cccccagttttacaaataatgcaagggtcgggcaacatacaccatactttagcaaacagt
attacaactaacagtttaactgttcacgcgccttcaccaccgccggtaccagtgtataat
aattctcatgttagtactgcacaagcgcaagctgtcagtcaagctttaagtcaagcagat
ggtgtatcaactggtggacaaacacagcaaagtcagccagtagaattcaaccatgcgata
aattatgttaataaaatcaaaaatcgtttccaaggtcaaccagataaatacaaacgtttc
ttggagatattacatacgtatcaaaaagaacagagaaacttaaaggaatctggacatatg
ggaggtacgagttctggcgctacaactggagcaaaacatttaacagaagcagaagtttat
agtcaagtggctaaattatttgaaaatcaagaagacttacttgctgagtttggacaattt
ttgccagatgctactaatcagcaaagttcgttgtctgctatgtttcagactaacaaaaca
acatcgattaacgatcatacggcgattgttaaaaaaccaattggtctcaaaacaccttac
aacaattctgggactatttcgagagatcttcgagaatccagcagtacggccggattggaa
cgcgataatcgagatcatagagaacgggaacgagaacgagatagatcgaacgtacgagac
atcaatagcggtcagaaacctgggcatagtaccggacagttgaaaaggagtccatcattt
tcaacttcggcaacagccggaaattctcatcacgtacaacatggaccgccgcctttgaag
aaacctaaagttgcttcgatgcgtgacgttactatagcggaagctggcaaatatggtact
ttgaacgactatgcgttctttgacaaggttcgaaagtcactcagatcacaagacgtttat
gagaactttcttcgatgccttgtactttttaatcaagaaatagtatcaaaatcggaactt
gttttgttggtgacaccgttccttggccgttacccagaactcttacgttggttcaaagat
ttccttggttatttaccagctgattcgtccgccactacgacggcaaactcgggtaatgca
gtaggcgtggagactttcccaaacagtgttgtacggagccatcaggaacgaccgcaaaat
gacttggcgatagaaatcgattatgcagcgtgcaaacgattaggagcgtcgtattgcgca
ttgccaaagtcgtatattcaaccaaaatgtggtggcagaacgcaattatgtaaggaagtt
ctcaacgatacatgggtctcgtttccaacttggtcagaggacagtacatttgtaacatca
aggaaaactcaatacgaggaatccatatatcgttgcgaggatgaacgttttgaattggac
gtcgttatagaaaccaacgcatcgacaattagggtactcgaaggcgttcataaaaagatg
aatagaatgagtcaagaagaagcgcagaaatataaacttgacgactgtctcggtggttct
tccccgacgattcatcaacgagcgataaagaggatatatggcgacaaatctcacgatatc
atagaaggtctcaaaaagaatcctcaaatagccgtgcctattgtactccgccggttgaaa
gctaaggaggaagaatggcgggaggcacaaaagggtttcaataaaatctggagagaacag
aacgaaaaatattacttaaaatccttggatcaccagggaattaactttaaacaaaacgat
gtaaaagcattgaggtctaaaagtttgttcaatgaaatcgaaaccatatatgacgagaga
cacgaacagggtgatgacagtaatggtgatggtcagggaaatagtggtccacacctcatt
ctaccatacaaagataaatctgtattagacgatgcagctaatcttttaattcatcatgtt
aaacggcaaaccggtatccataaggaagacaagcagcggataaaacttttattaaagcat
ttcatacctgatctctttttccatacacgacaagaacttagtgacgacgaaagggatgaa
gatgatgaaaaggatataaatgtggcatcgtgtaacaattcccagtcctcgacgactact
tcgtcgttaagtggcctgcaagctaataggaataaggcttccgtatcgccaaatacgtct
tccacctccgccaaaaatgaagccgatatcaaagtacctatacacgctctctcgaatgat
cccgaagaggcatatacactttacatggccagtaataattggtacctctttttgaggtta
catcacatactctgcgagagattgacgaaaatgtacgacagagcagtcgctctcgccgag
gaggagtcaaagtataagcaacaacgcaaggaaagtacagcgatcgctttaagattaaaa
ccaaaaagtgaaattgaaattgaggattattaccccgcttttctggacatggtaaaaaat
gttctcgacggaaacatggaaagcacagcgtacgaggacacgttacgagaaatgtttggt
atacatgcctacattgcctttactcttgataagatcgtaacttacgctgtgaggcaattg
cagcacttagtcacagacaccatatgccagcaatgcatggaattattccaaagagagcaa
cgtcaacctaaagaaagcagcggagccggcgggttgtgcgctacggcatatatgagatta
agtgctgaattagcatatcaacgcaaagcggaaaaaacaatggtcgatgaaaattgtttc
aagatatatatatacaagaaagactgtaaaatgacagtggagttgttagatacagagggc
gacgaaacggtggatagtggctgtagagagagagaaagggaaggcgtcacagtctctgaa
aaatggtcgacgtacgttgagagattttctgcaccagctggtcaggctagcccaaaagac
actcctgccttaacagagaatgagccaccgaccaatcatcctgtgagtagcgaccaggca
gcaaggggggggaggggcagaaaacgcaagaacactgacattagcaagaagatggacgga
aatagttggagttccttaggcagagcttcggcgggacggaagcccatctttctctatcgc
aatattaagtcttatcgaaaacacgctgcgagattagcaaaggagaaacaatctttgctt
aataccaatcatccggagagagtcacagactcggtcgacgctcccgacattatcaattcc
gacgagacgcaatgtagatttaatccaaacagctataccatgcttttcattgttcataag
gacaggtttctttacaaacagaagtctatcaaccgcgctaggatgtctcatccagctgta
acgaagcgtatggacacgaaattccaccattggcacgcatcgtggatatcgaagaatggc
acggacactcaacatcgattgtgtcaagattggctgatgggacgctacgagaatttgatt
ccccataggacacgagttgtaacgaacaatgatcagacacgttctccttatcggcaatac
aatcgtttcaaagtagaacgtctgcaatctgatctattgacttcggagccgtgtgtctaa
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integrated database retrieval system
