Formica exsecta (narrow-headed ant): 115240728
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Entry
115240728 CDS
T07422
Name
(RefSeq) transcription factor SOX-9-like isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fex03000
]
115240728
Transcription factors [BR:
fex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115240728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
PE
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
115240728
NCBI-ProteinID:
XP_029671921
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MKMNDVKPESSSTSISSPGGNNNINNNNNNNNNNINGNGKAAAAAAATVAANGGEGISAA
VAKVLQGYDWTLVPVATKGSGDKRAAHVKRPMNAFMVWAQAARRKLADQYPQLHNAELSK
TLGKLWRLLSDNDKKPFIEEADRLRVIHKREHPDYKYQPRRRKQNGPSSGRDSSPSRNQS
NVTFSVSRSLKQEDMSPRGVQGPNSPQSGVSSSPPTTPSQGLSPPTPPTTPRGQHYVNQT
NQPPQNNTVYYQELISNTPSSDSPHQQPAVDLRYIEVGDGLSGEENQLNGLGTLGGLGLN
LPVNFQECEVESSELDQYLPPQTAPIHQYPPVQVTTTSQWLVNRYEEEIERPIKRHCSEQ
AIAEVSWEDRTQEMVRYHELQPPLPPVQYISAHNAHHSHANAQMGHPHVSTSYTQYAHRY
VPGIETWPNYM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaacgacgtcaagccggaaagctctagtacgtccatttcgtcgccaggcgga
aacaataatattaataacaacaacaacaacaataataataacattaacggtaatggtaaa
gcggcagccgccgccgcggcgacggtagctgccaatggcggcgaagggatcagcgccgcc
gtcgccaaggttcttcagggatacgactggactctggtacccgttgctaccaagggctcc
ggcgacaaaagggcggcccatgtcaagaggcccatgaacgcgtttatggtgtgggcccag
gctgctaggcgaaaactggccgatcagtatcctcagcttcacaacgccgagctgtcaaaa
acgctaggaaagttatggcggctcctgtccgataacgataagaaacccttcattgaggag
gccgatcgcttgcgcgttatccacaagcgcgagcatcccgattataagtatcaaccacga
cgtcgaaagcagaacgggccttcttccggtcgtgacagttcaccctcgaggaatcagagc
aacgtgacgtttagcgtttccaggtcgttgaaacaggaggacatgagtcctaggggcgtg
caaggacctaattcaccacaaagtggcgtgagctcctcgccaccgacgacacccagtcaa
ggtctttcaccgccgacaccccctacgacacccagaggacagcattatgtcaatcagacc
aatcagcctccgcagaacaatactgtgtactaccaggaattaattagcaatacgccatcg
agcgattctccgcatcagcagccggcggtcgatcttcgatacatcgaagtcggagatggc
ctttccggcgaggaaaaccagttgaatggccttggcactttgggcgggctcggcctgaat
ctcccggtgaacttccaagagtgcgaggtcgagagcagcgagctcgaccagtatctacca
ccccagaccgcgccgatacatcaatatccacctgtgcaagtcaccaccacttcgcaatgg
ctagttaacagatatgaagaggagatcgagaggccgatcaagcgccactgctcggagcaa
gcgatcgcggaggtttcatgggaggataggacccaggagatggtcaggtaccacgagtta
cagcctccccttccaccggtccagtacatatctgcccataacgcacatcactcgcacgcg
aacgcgcagatgggccatccgcacgtgtccacgtcttatacgcaatatgctcatcgctac
gtacctggcatcgagacgtggccaaattacatgtag
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