Formica exsecta (narrow-headed ant): 115240839
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Entry
115240839 CDS
T07422
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03430
Mismatch repair
fex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115240839
03460 Fanconi anemia pathway
115240839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fex03400
]
115240839
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115240839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115240839
NCBI-ProteinID:
XP_029672090
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MDEPVATTEKSKKIEAINKKTIHHICSGQVVLDLAIAVKELVENSLDSNATVIDVKLIDY
GKTCISVSDNGSGVLEQDFEGLGLKHHTSKLREFTDLTEVNTFGFRGEALSSLCALSELS
IVTRHSTSEHGFKLEFDKNGVLTKKEPCAREKGTTVHIRNIFKNLPVRAKEFQKNLKKEY
ARTIQVLYSYCLVSTNIKIACSNLIASKSPHFIVATRNTDSVLDNINSVFGKKSLDGIIK
LELQPPEETTLQEYNLPNDITIDFDWECYVSTCDHAIGRSSPDRQFFYVNGRPCDLTKVS
KLVNNVYHKYNNKQYPFVFLNIKLNRQCADVNVTPDKRTIFFTQERLILATLKFSLTAKW
DKLQGNFTAKPLTELKFGLKRTVSSNYAHPPAKRLQVSPSISHTAKNDYIQTNIKSMKEP
IDVEMVISFTMIKEKLKEKEKENIIQTSVNTEKRIKYRIQMEANQDEAEKELQRELTKDS
FGKMEVIGQFNLGFIIARLENDLFIIDQHATDEKFRFEKLSNETKLKTQKLIMPKPLNFS
TLNETILIEHQQTFEDNGFTFNINEQAEPGKKIELVGMPVSGNWQFGQEDIEELVFLIRE
AGNENKEKHIYRPSRVRQMLASRACRSAVMIGTALNTSEMHKLIMQMTQMQNPWNCPHGR
PTIRHLLSLLLINK
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacctgtcgcaacaacggaaaagtcgaaaaagatagaagctataaataaaaaa
actattcatcatatttgctccggtcaggtagtactcgatctcgcaatcgctgtcaaggaa
ttagtggagaatagtttggacagcaatgccacggtgattgatgttaaacttattgactat
ggtaaaacctgtattagtgttagtgataacggtagtggtgttttggaacaagattttgaa
ggcttaggcttgaaacatcatacgtcaaagttgcgggaatttacagacttaactgaagta
aatacatttggttttcgtggcgaagcattgagttcattatgtgccttgtctgaattgagt
attgtcactaggcattcgaccagcgagcatggcttcaaattggaatttgataaaaatggc
gtgcttacgaaaaaggagccatgcgctagagaaaagggaaccacagtgcatataaggaat
atattcaaaaatctacctgtgagagcaaaagagtttcagaaaaatctgaagaaggaatat
gcacgcacaatccaagtcttgtacagttactgtttagtttctaccaatatcaagattgcg
tgttccaatctgatagcaagcaaatcacctcattttatagtagccacaagaaacacagac
agcgtgttggataatataaattcggtgtttggcaaaaagtctttagatgggataattaaa
cttgaattacaacctccagaagaaacaacattgcaagaatataatttgcctaacgacatt
acaatagacttcgactgggaatgttatgtgagcacttgtgatcacgcgatcggacgttcc
tcgcccgatcgacaatttttttacgtgaacggtcggccgtgcgatctcacgaaagtcagc
aaactggtgaacaatgtgtatcacaagtataataataagcaatatccgtttgtttttcta
aatataaaattaaatcggcaatgcgccgatgttaatgttactcccgacaagaggacgata
tttttcacgcaagaacgtctcatattagcaacattaaaatttagtttaacagcaaaatgg
gataaattgcaaggaaattttacagccaagcctttaacggagttaaagtttggtttgaaa
aggacagtttcatcgaactatgctcatccgccagcaaaaagattgcaagtatcaccttca
atatcgcatacagcgaaaaatgattatattcagaccaacattaaatcaatgaaagaacct
atagatgtagaaatggtgataagttttacaatgatcaaagaaaaactaaaagaaaaagaa
aaagaaaatattattcaaacatctgttaatacagaaaaaagaataaaatatagaatacaa
atggaggccaatcaagatgaagctgaaaaggaattgcaaagagaattgacaaaagattcg
tttggcaaaatggaagtaataggccagtttaatctcggttttataatagcacgtttagag
aacgatttatttatcattgatcagcatgctactgacgaaaaatttcgtttcgagaagctc
agtaacgaaacgaaattgaaaacccaaaagctcatcatgccaaagccactgaatttctcc
acattgaacgaaacgatactcatagagcatcaacaaacgtttgaggataatggatttacc
ttcaatatcaacgagcaagctgaacctggcaagaaaatagaattagtaggaatgcctgtt
agtggtaattggcaatttggtcaagaggatatagaggaattagtatttctcataagagaa
gcaggtaatgaaaataaagagaagcatatatatcgtcctagtcgggttagacaaatgctg
gcgtccagagcgtgtcgaagtgcggtaatgatcggcacagctctaaacaccagtgaaatg
cacaagttgataatgcaaatgacacaaatgcaaaatccatggaattgtccgcacggtagg
cccaccataagacacctattgtcgttattattaataaataaatga
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