Formica exsecta (narrow-headed ant): 115241144
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Entry
115241144 CDS
T07422
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115241144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fex03400
]
115241144
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115241144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
115241144
NCBI-ProteinID:
XP_029672564
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MAVQPNQQLSMDPPTQQSFVRFFKNLPEKLDTTIRFFNRSDYYTLHGSDALFAAQEVFKT
TSVCKMIGAEPHKTEGVILNKGHFETFVRDLLLVKQYRVEVYVNQGSSKNQNWVLEYKGS
PGNLSHFEDILFGNNDIAVGVSVIAVKLGTEGKSRVVGLSCVDVVSTLILVAEFQDNESF
SNLESLIVTLAPKECLLIQGEGSHEFQTLKQLIERNNTMVTLRKRNEFSSDSIIDDLNTL
IKFKKGQKQNAQSLPEVNLNLAMSATSALIKYLDLTSDEGHMNQFSLKQVEQSRYIRLDS
AAIKALNIEPQSDGASNLHGNPAASVLTLLDKCRTAQGHRLIAQWVRQPLRDLSLIKERH
DIVELLVQNNELRSVLNDDYLKRIPDLQQLAKKLARKKSALQDCYKIYLCVSYLPKLLEQ
LSPEASVTALKTMIIDPLKELIDDMDKFQQLVEQTIDLDAAEKGDFMVNPGFADDFKELK
DAMDETEERIQRQLGKAADDLGMEAGKTLKLESNQQLGYYFRITLKEEKILRNNKRYTIL
DSNKTGVRFRNSKLSELNDDFIIARNKYLERQKDVITEIIGIAAGYSETMRTIGGVLARL
DVLTAFASAAVSANKVYVRPEMVPSEEGEMNLIQVRHPCLEMQQGVDYIANDINFKRDQY
HFCIITGPNMGGKSTYIRSIGVAALMAHIGSFVPCDRATISLLDCILARIGADDSQLKGL
STFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIACSIAEHLARDIKSYCLFAT
HFHEITRLAEEVPTIQNHHVTALVEDNKLTLLYKVKPGICDQSFGLHVAKMANFPPDVIE
FAKRKQAELEDYQSVVFEGSNNPHKKRKIIQEAETLISQFLKKCKTLDLSLSDADIENEV
LSLKEEVLSHKNPYIKALLDASS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacaacctaatcaacagttgagtatggaccctcctacacaacagagctttgtt
agattttttaagaatcttccagagaaacttgacacgacaatacgattcttcaataggtca
gactattatacattgcatggaagtgatgctctctttgctgcacaagaagtatttaaaaca
acatctgtttgtaagatgattggagctgagccgcataaaacggaaggagtcattctgaat
aaaggtcactttgagacatttgtgcgtgatttgttgttagttaagcaatacagagttgaa
gtctatgtaaatcaaggctcgtctaaaaatcagaactgggtcttggaatataaaggttca
cccggtaatctatctcattttgaagatattctgttcggtaataacgacatagccgtgggt
gtatctgtaatagctgtgaaactaggtacggaaggaaaatccagagtcgttggactaagt
tgtgtggatgtcgtttcgactttaatcttagtcgccgagtttcaagataacgaatcattc
tcgaatttagaatcactcattgtaactctggctccaaaagaatgcttactaattcaaggg
gaaggcagtcatgaatttcaaactcttaaacaattaatagaaagaaacaatacaatggtc
actttaagaaaaagaaatgaattttccagtgattcaatcatagatgacctaaatacatta
ataaaattcaaaaaaggacagaagcagaatgcacaatcactgcctgaagttaatttaaat
ctagctatgtctgctacttctgctctcatcaaatatttagatttaacatcggacgaaggc
catatgaatcagtttagtctaaagcaagtggagcaatcgcgatatataagattagattcc
gcggcaataaaggctcttaatatagaaccgcagagtgatggggcttctaacttgcacgga
aatcctgccgccagcgtcttaacgttattagacaaatgcaggaccgcacaagggcatcga
ctgattgcacaatgggttcgacagccccttagagacttgtctctaataaaggaacggcat
gacatcgttgaattattagtacaaaataacgaattaagatccgttcttaatgatgattat
ttaaaacgtataccagatttgcaacagctcgcaaaaaaattggctagaaaaaaatcagca
ttacaagattgttacaaaatctacttgtgtgtatcatatttgccaaaactattagaacaa
ctctcaccagaagcaagtgtaacagcactaaagacaatgataatagatccattaaaagaa
ctgatagacgatatggataaatttcaacagttggtggagcaaacaattgatttagacgct
gctgaaaagggagattttatggttaatccaggatttgcggatgatttcaaagaattaaaa
gatgccatggatgaaacagaggaaagaatacaacgacaacttggtaaagcggcagatgat
cttggcatggaagcagggaaaacgttaaagttagaatctaatcaacaattgggctattat
tttcgtatcacgttaaaagaagagaaaatacttagaaataataagcgttatacaattttg
gattctaataaaaccggtgtaagattccgaaacagtaaattgagcgaattaaacgacgat
tttataatcgccagaaataaatatctggagagacagaaagatgttattacggagattata
ggaatcgcagctggttatagcgaaacaatgcgtactattggtggtgtgctggcacgcctc
gacgttctcacagcgtttgcttccgcggcagtaagcgctaacaaggtatatgtgcgtccc
gagatggttccgagtgaagaaggtgaaatgaatcttattcaagtcagacacccatgtttg
gagatgcagcaaggagtagactatattgccaatgatattaattttaaacgagatcagtac
catttttgcatcattactggcccaaacatgggaggtaaaagtacttatattagatctatc
ggtgtagctgcattaatggcacatattggtagttttgttccttgcgatagagcgactata
tcgttattggattgtatattagctcgaataggagctgatgattctcaattgaaaggattg
tcgactttcatgatggaaatgatagaaactgcagctattttgaaaacagcaacatgtaac
tctcttgtaatcattgatgaattgggtagagggacatccacttatgagggttgcggtata
gcatgttcaatagcagaacatttggcaagggatattaaatcgtattgtctgtttgctaca
cacttccatgagatcaccaggttagccgaagaagtacctactatacagaatcaccatgtt
actgctcttgttgaagataacaaattgacattactttataaagtaaaaccagggatttgt
gaccaaagttttggtcttcatgtcgctaaaatggctaattttccgccagacgtgatagag
tttgccaaaaggaagcaagctgaacttgaagattatcaaagcgtggtttttgaaggatcc
aataatccccacaagaaacgaaagatcattcaggaagctgaaacactcatttcgcaattt
ctcaaaaagtgtaaaactttagatctgtctttatctgatgctgatatagaaaatgaggta
ttatcattgaaggaagaggtactgtctcataagaatccttacattaaagcgttactcgac
gcttcttcttaa
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