Formica exsecta (narrow-headed ant): 115241234
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Entry
115241234 CDS
T07422
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115241234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fex03021
]
115241234
03036 Chromosome and associated proteins [BR:
fex03036
]
115241234
Transcription machinery [BR:
fex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115241234
Coactivators
SAGA/TFTC/STAGA complex
115241234
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115241234
STAGA complex
115241234
TFTC complex
115241234
SAGA complex
115241234
SLIK complex
115241234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_RIG_1st
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
115241234
NCBI-ProteinID:
XP_029672751
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MDNDKSTMLAVLQLLKKYNLKGTEELFRKEANLTDISAEEAQQTDSEVTSVLSAYKSEGD
PAQYEKAYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSGEAKQLMEKFSGN
LEEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKEQIDATSGAMVGEATRQDNKAKVYYGLLKEPDIQCVAPAEE
EEDDTGGGDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKVKALREA
SKRVILGPDMLPSICFYTLLNTVHTVTAAEVAEDSSLLAIGFSDSGIKVWSLVPQKLRLM
KTGEQLSEVKQESEDVLVRMMDDRTSEITKNLYGHSGPIYSLSFSPDRNLLLSSSEDTTI
RLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFASASNDKTARLWATDSHQPLRIFAGHY
SDVDVIQFHPNSNYVATGSSDMTVRLWDCVTGSQVRLMTGHKGPIFSLAFSTEGRFLASA
GADHRVLVWDLAHGHLVAALSGHTNNIHCLSFSRDGNILVSGSLDYALKLWDFTKLAEEM
SLEDVNVSHNPDVKTNAESYLLRTFATKNTSVLTIHFSRRNLLLGIGMFDST
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggataacgataaaagcactatgctagctgttttacagctcttgaagaagtacaattta
aaaggaactgaagaattgtttagaaaagaagctaatctcacagatatctcagctgaagaa
gctcagcaaactgattccgaagtgactagtgttctttctgcttacaagagcgagggagac
cctgcacagtatgagaaagcatacagcgaattgaaaaaatttgtagaaggagctttggat
atttataagcacgaactggggaccattctatatccagttttagtacatatgtatctagaa
ttagtttacaataatcattctggagaggcaaaacagctcatggaaaaattcagtggaaat
ttagaagaatattatcaagatgacttgaaaagattatccaatgtaacaaaacgagagcaa
atggcagggaatgaattaactgatacttttaaatccaatcagtttataattagaatgtca
agggatacactttctatattaaaacgacatttgcaagaaaagaaacatagtgttttatta
aatattatacaggaacatctttactttgatatgtatgagggtgttgctcgcaataaagaa
cagatagatgcaacatctggagctatggtgggcgaagctactagacaagataacaaggcc
aaagtctattatggacttttaaaggaaccagatattcagtgtgtagcgccagctgaagaa
gaagaggacgatacaggtggtggagatggagataaaccaaaaaagaagaaagctaagaaa
gatcctttgttttcaaaaaaaaccaaatcggatccaaatgcaccacctgtcggcagaatg
ccattacctaatctgaaggatgcagataaacttgaaaaagttaaggcgttaagggaagcc
tcaaaaagagttattctaggaccagatatgctaccatctatatgtttttatacattgctg
aacacggttcatactgtaacggcggcagaagtagcagaagactcaagtttattagctatt
ggattcagtgattctggtataaaagtttggagcttagttccacaaaaattgaggttgatg
aagactggcgaacaattatcagaagtcaagcaagaatcagaggatgtgctggttagaatg
atggatgatagaacatctgaaattacaaaaaatctttatggtcatagtggaccaatttat
agcctttcatttagtccagatagaaatcttttgctttcatcatcagaagatactacaata
agactatggtcactccatacatggacatgtgtcgtgtgttacaaaggtcacttatttcct
gtgtggtgtgtaagattctcaccgcacggttattactttgcaagtgcctcaaacgataaa
actgccagactatgggcaaccgattctcatcaaccattacgaatatttgctggtcattac
tcagatgttgatgtaatccagtttcatccaaattcgaattacgtcgcaactggttcgagc
gacatgactgtaagattatgggactgtgtgaccggcagtcaagttcgattaatgaccggg
cacaaaggaccgattttttctctagctttttcaacggaaggacgatttttggcttcagcc
ggtgccgatcatcgcgtactcgtatgggacctagcgcatggtcatctggtcgcagccttg
tcgggacatacgaataatattcattgcttgtcgtttagtcgagacggcaatattctcgtc
tcaggatccttagactatgcactgaaattatgggatttcacaaagttagcagaagagatg
agtctagaagatgtgaatgtttcgcacaatccagatgtgaaaactaatgcagaatcctat
ttgttgcgtacttttgctacaaaaaatacatctgttctgacaatacatttttcacgtaga
aatttactgctgggtatcggtatgttcgattctacgtaa
DBGET
integrated database retrieval system
