Formica exsecta (narrow-headed ant): 115241540
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Entry
115241540 CDS
T07422
Name
(RefSeq) ATP-dependent RNA helicase Ddx1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115241540
03016 Transfer RNA biogenesis [BR:
fex03016
]
115241540
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115241540
Spliceosome [BR:
fex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115241540
Transfer RNA biogenesis [BR:
fex03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
115241540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Cas3-like_C_2
CMS1
AroM
Motif
Other DBs
NCBI-GeneID:
115241540
NCBI-ProteinID:
XP_029673182
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVDELDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDLESGKGAGAVAQAQQSTHWALSLFDRGRALAVTPDGLRCQSREQKEWHGC
RANKGISGSGKYFFEAIVTDEGLCRVGWSTPQAALDLGTDRFGYGFGGTGKKSNAKQFDN
YGEAFGMHDVIGCFLDLARGEIKFSKNGVDLGVAFALNAQQKSQTYYPAVVLKNAEMAFN
FGAQPFKHPPPNDYVAVSSAPKESIKHNSVSSNQNQSKEGDKPTNNAPQAIIIEPSRELA
EQTYNQIQKFKIHLKNPTIRELLVIGGVNVKEQIAILNSGVDIVVGTPGRLEDLIQGGYL
LLTHCRFFVLDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMVVCSATLHAFEVKKMA
ERLMHFPTWVDLKGEDAVPETVHHVVVIVDPQKDKSWHNSRNHVETDGVHARDNVRPGNN
TAETLSEAVKMLKGEYCIRAIKEHRMDRALIFCRTKLDCDNLERYLKQAGGQQFSCVCLH
GDRKPAERKANLEKFKRQEVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRV
GRAERMGLAISLVSSVPEKVWYHGEWCPSRGRNCQNTNLTNQGGCCTWYNEPNYLAEIED
HLNVTIQQVGSDIKVPLNDFDGKVTYGEKRMAMGSNYENHVQQMVPVVAELATLESRAQI
TFLKNHIAER
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgactgccttcgaagaaatgggtgttttgccagaaatagcaaaagcagtagatgaacta
gattggacactaccaactgatgttcaagctgaggccattccgctgatcctgggtggtgga
gatgtactgatggctgcggaaactggcagtggaaaaactggtgccttctgcttgcctatt
ttacaaatagtctgggagactctcaaagatttggagtctggaaaaggagctggagctgtt
gcacaggctcaacaatcaacacactgggcattaagcctgtttgacaggggacgagccttg
gcagtaacaccggatggtttaagatgtcagagtagagaacagaaagaatggcatggttgc
cgtgcaaataaagggatttcaggaagtggcaagtacttttttgaggccatagttactgac
gaaggcttgtgccgagtgggttggtctacgcctcaggctgctttggatttaggaacagat
agattcggttatggattcggcggtactggaaaaaaatcgaacgcaaagcaatttgacaat
tatggggaagccttcggaatgcacgatgtaatcggatgtttcctcgatttggcgaggggt
gaaataaaattttccaaaaacggcgtagatttgggcgttgcatttgcgttaaacgcgcaa
caaaagtcgcagacttattatccggccgtcgtgctgaagaatgccgagatggccttcaat
tttggagcgcaaccatttaagcatccacctccgaatgactatgtggctgtgtcgtcggct
ccgaaggaatccatcaagcacaattccgttagcagcaatcagaatcaatcaaaagaaggc
gataaaccgacaaataacgcgccccaagcgatcatcatagaaccttctcgcgaattagct
gaacaaacctacaatcaaattcaaaagtttaaaatacatttgaaaaatccaacgattaga
gagctgctcgttatcggtggagtaaatgtgaaagagcagattgccatcttaaattcaggt
gtggatatagtcgtcgggactcccggacgtttagaggatcttatacaaggcggttacttg
ttgttaacgcactgcagattctttgtgctggacgaagctgacggattattgaagcagggt
tacaccgaacttatcgatcgcctgcacagacagatcccaaaaattacatcggacggcaag
aggttgcagatggtcgtgtgctcagcgacgttacacgcattcgaagttaaaaagatggcc
gaacgtttaatgcattttccaacttgggtggatctgaaaggcgaagatgcagtgcccgag
actgtgcatcatgtcgtagtgatagtagatccacagaaggacaaatcgtggcataattcg
agaaatcacgtggaaaccgatggtgtacacgcgagagataacgtgagaccagggaacaat
accgccgagacgttgtcggaggccgtaaagatgctgaagggagagtactgtatacgcgcc
atcaaagaacacaggatggaccgggcgttgatattctgcaggacgaaactcgattgcgat
aatctcgagagatacctaaaacaggccggcggacagcagttctcatgtgtatgcctgcac
ggagacaggaaacccgcggagcgtaaggctaatctggagaagttcaaacgtcaggaagtg
aaatttttgatctgcaccgacgtggcggccagaggattagatattaccggtctgcctttt
atgataaacataactcttcccgatgaaaagtccaattatgtgcatcgcatcggacgagtc
ggcagagccgagagaatgggtctggcaatttctttagtcagtagtgtgccggagaaggtg
tggtatcatggtgaatggtgtccttctcgtgggagaaactgtcaaaataccaatctgact
aatcagggtggttgttgcacttggtacaatgagcccaactatttggcggagattgaggac
catttgaatgtgacaattcaacaagtcggatcagatataaaggtgccgttgaatgatttt
gatggaaaagttacatatggcgaaaagagaatggcaatgggttccaattatgaaaatcat
gtccagcaaatggttcctgttgtggcggaattggccacattagaatccagagcgcagatc
acgttcttaaaaaatcatatagcggagcgttag
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