Entry |
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Name |
(RefSeq) probable ATP-dependent RNA helicase DDX43
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KO |
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Organism |
fex Formica exsecta (narrow-headed ant)
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Brite |
KEGG Orthology (KO) [BR:fex00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:fex03041]
115241569
Enzymes [BR:fex01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115241569
Spliceosome [BR:fex03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115241569
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
658 aa
MSHRREDNRTSSDRYDQNYRNWEGNRDRRDSQFQSHYNRSSSDNWNSSNTQTYSNSSRKR
STDNSSNNTNELVIYIDANNVGRLIGRGGSKIKALQDESNAKINIDKQSNENGQTAVTLI
GTDEAQQRAKSLIEELLIDRSISHQGIESNQKRETNFGEKKEEIDWNNFDWVKANEEYEN
HQKERWATLPPIIKNFYKEDIYVTHMPETRVAELRKINNDIEVKFVFENEEGSDKIKIPN
LIQTFKQAFQNYPEILREIQKQGFEKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLL
PALIHIDGQVTPREERPGPNVLVMAPTRELALQIEKEVGKYSYRGIKAVCVYGGGSRKQQ
IDIVTKGVQIVIATPGRLNDLVQAGVLNVTAVTYLILDEADRMLDMGFEPQIRKTLLGVR
PDRQTVMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAAVHSVTQKICLINEDEKLDMMH
QFLREMGSHDKVIVFFGKKAKVDDISSDLALANIDCQSIHGDREQADREQALEDLKTGAV
QILLATDVASRGIDIEDITYVLNYDFPKDIEEYVHRVGRTGRAGRTGESITFMTRQDWHH
AKELISILEEADQEVPEELYKMAERYEAWKQRKDSERSGLRNSRDGNRGRQGYNRSRW |
NT seq |
1977 nt +upstreamnt +downstreamnt
atgagtcacagaagggaagataacagaacatcatcagacagatatgatcaaaattatcgc
aattgggaaggaaacagagacagaagagacagtcagtttcagagtcactataacagatct
tccagtgataactggaatagttcaaatactcaaacttacagtaacagttcacgtaagagg
agtactgataatagttcaaacaatacaaatgaacttgttatatacattgatgccaataat
gtcggaagacttattggaagaggtggtagcaaaattaaagctctgcaagatgagagcaat
gctaagatcaatattgacaaacaatcaaatgaaaatggacaaactgctgtgacattgatt
ggtacagacgaagcacagcaacgagctaaaagtttaatagaggaattattaattgataga
agtatttcacatcaaggtatagaatctaaccagaagagagaaactaactttggagaaaag
aaagaagaaattgattggaataattttgattgggtcaaggccaatgaagaatatgaaaac
catcaaaaggaaagatgggcaactttgcctcctattataaaaaatttttacaaggaggat
atatatgttactcatatgccagaaacgagagtagccgaactcaggaaaatcaacaatgat
atagaagttaaatttgttttcgagaatgaagaaggctctgacaagataaaaataccaaat
cttattcaaacctttaaacaagctttccaaaactatccagaaattcttagagaaatacaa
aaacagggatttgaaaaaccgagtcctatacaatgtcaggcatggcctattctattgagt
ggtcaagacctcattgggatagcacaaactggaactggaaaaactcttgcttttttactg
cctgctttaattcatattgatgggcaagtaactccacgtgaggagcgccctggaccaaat
gtccttgttatggcaccaacaagagaattggcattgcaaattgagaaagaagtaggaaaa
tattcttatcgcggcattaaagcagtgtgcgtttatggtggtggaagtcgcaagcaacaa
atcgatattgtaacaaagggcgtgcaaatagtaattgcgactcccggaagattaaatgac
ttggtgcaggcaggagtgttgaatgtaacagctgtaacatatctcatacttgatgaagcc
gatcgtatgttggacatgggttttgaaccacaaattcgcaaaaccttactgggtgtgcgg
ccagatagacaaactgttatgacgagcgctacatggcctccaggtgtaagacgcttagct
caatcatatatgaaaaatcccattcaagtatgcgttggatcacttgatttagcagctgtt
cactctgtaacacagaagatttgcttgattaatgaagatgaaaagttagatatgatgcac
cagttcttgcgtgagatgggttctcatgacaaggtgatagtattttttggtaagaaggca
aaggtggatgatatttctagtgatctagctttagcgaatatcgattgtcaaagcattcac
ggtgatagagagcaagcggatagggaacaagcattagaagatctgaagactggtgcggtt
cagattcttcttgcgaccgatgtggctagtcgaggaatcgatattgaagacattacatat
gtactgaattatgacttcccaaaggatatagaggaatacgttcacagagttggtcgtacc
ggacgcgcgggtcgaacaggagaaagtatcactttcatgacaagacaggactggcatcat
gctaaggaactcatcagtattcttgaagaggctgatcaagaagtacctgaggaattatat
aaaatggctgaaagatatgaagcatggaagcagaggaaagattcagaacgatccggtcta
agaaatagtagagacggcaatagaggtagacaaggctataatcgtagccgatggtaa |