Formica exsecta (narrow-headed ant): 115241623
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Entry
115241623 CDS
T07422
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03030
DNA replication
fex03410
Base excision repair
fex03420
Nucleotide excision repair
fex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115241623
03410 Base excision repair
115241623
03420 Nucleotide excision repair
115241623
03430 Mismatch repair
115241623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fex03032
]
115241623
03400 DNA repair and recombination proteins [BR:
fex03400
]
115241623
DNA replication proteins [BR:
fex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115241623
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115241623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_30
Rad17
AAA_22
AAA_5
RuvB_N
AAA_14
BRCT_2
AAA_17
AAA_33
AAA_16
RNA_helicase
NTPase_1
AAA_6
AAA_19
AAA_18
AAA_7
MGS
PTCB-BRCT
AAA_assoc_2
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
115241623
NCBI-ProteinID:
XP_029673328
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MPRDIRSYFTSVATSQKKNSEPVASKSQKRRVISSDEDEEKSKSSAKRTKIVRKKPTKVS
VLSDSDDDIIVKKDFTKSEANKKNESEKLCETISFGELFGKRPIMRVEETKVSQKLQKLE
SEFHNDDDFDAILKQLDTSQDVIIQDTKKDKDGIENANISQKSDEPFKTEIISIKSKKHT
YLKNNQTNKTNMTKTKEMKKSPSKNNVYSKMITLPSKEKLKMKKDSSSSNEDLDTNNKCS
DDKSKKLNLNNLAINISRPVSTAKENGIKKQSPDKKKAKMVDLFEERIEKKKQRTAMYEK
YLQRGGARNPGSKEIPTGAQNCLAGISFVLTGVLDSLERNEVEDLIRKYGGRTVNTVSGK
VNYIIVGDEAGPSKLAKANNLGTKQISEDDLLEMIRTRPEGKAEDVKPVVIKAKSNVKKI
LNTFEEDKSLLTEKAKSTLTDLYDLSEKIKSPPCSPVKMKTSSSIPKQTIDAINYSQETT
TSIGLQPLVEKYRPKTMKQIIGQQGDKSCAHNLYVWLRDWDKNRQDPKFKNSNNKQTHGQ
SFKAALLSGPPGVGKTTTVQVVCKELGYDLVEFNASDTRNKTLLKEEVSGLLSNTTMKDY
ITGGTKRKITSKHVLLMDEVDGMAGNEDRGGLQELLNLIKNTQVPIICICNDRFNTRVKT
ISVHSYDLRFHKLRVEQIRSSMKSLCFKEKINISTEDLDRLIESTNYDIRQVINHLEFLG
GRTPHVEATDRKHSNKNFKLGPFDVVKMAFKAEEQKNMSLNDKIGLYFHDYNIAPLFVEE
NYLSVRLSQIPLLQRLDKIAQAADSISQGDLIEKAMRSNMMWSLLPLHACFSFVIPTSEM
SGSLDSLVRFPGWFGRNSKTTRFNRLMQELTMHTRLATGANKDALNMDYLVHIRNAIIKP
LIDNGVDGIETAINIMGKYYLTREDLDSIIEISFWPEIRDPTSNLDSKVKAAFTRAYQKN
PPMLPYVINSNITTKKRSMQDENLIEEENDEEDDSIESDKMIKAKKPAGSTSKAAASTKR
SGEPVKKRVKGRDKPK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggatataagatcctattttacgtcggttgcaacttctcagaaaaagaatagc
gagcccgttgcttcaaagtctcaaaagaggcgtgtaatttcgtcagatgaagatgaagag
aagtcgaagtcatccgcaaaacgcaccaaaattgtacgaaaaaaaccgacaaaagtttct
gtcttgtctgactctgacgatgatataattgtgaagaaagattttacaaaatcagaagca
aataagaaaaatgagagtgaaaagctatgtgaaacaatctcttttggcgaactatttggt
aagaggccaataatgagagtagaagaaacaaaagttagccaaaaactacagaaactggaa
tctgaatttcacaatgatgatgattttgatgctatacttaaacaattggacacttcgcag
gatgtgataatacaggatacaaaaaaagataaagacggcattgaaaatgcaaatatttcc
caaaaatctgatgaaccatttaaaacagagataatttcaattaaaagcaagaaacatact
tatttgaaaaataatcaaacaaataaaacgaacatgacaaaaactaaagagatgaaaaaa
tctcccagtaaaaataatgtatattcaaaaatgattactcttccttcaaaagagaaatta
aaaatgaaaaaagacagctctagctctaatgaagatttagatacaaataataaatgtagt
gatgacaaatcaaaaaaattaaacttgaacaatttagcaataaatatctcaagacctgtt
tctactgcaaaagaaaacggcataaaaaaacaatcgccagacaagaagaaagccaaaatg
gttgatttatttgaagaaagaatagaaaagaagaaacagcgtactgcaatgtacgaaaaa
tatcttcagagaggtggcgccagaaatccaggttcaaaagagattcctacaggtgctcaa
aactgtttagctggtataagttttgtgctaactggtgttttggattctctggaaagaaat
gaagttgaggatttaatacgcaaatacggcggtcgtactgtgaacactgtttcaggcaaa
gttaattatattatagtaggagatgaggctggtccatcaaaattggcaaaagccaataat
ctgggtaccaagcaaatatctgaggatgatctcctggaaatgatccgcacaagaccggaa
ggtaaagctgaagatgttaaaccagttgtaataaaggcgaaatcaaacgtgaaaaaaata
ttgaatacatttgaggaagataaatcgctattaacagagaaagcaaaatcgacactaaca
gatttatacgatctttctgaaaagataaaatcaccaccatgttcacctgtgaaaatgaaa
acgtcatcatcgataccaaagcagacaatagatgcaatcaattattcacaagagacaact
acaagcatcggcttgcaaccgttagttgaaaaatatagacctaaaactatgaagcagatt
ataggacagcaaggagataagagctgcgcacacaacttgtatgtgtggttgcgcgattgg
gataagaatcgccaagatccgaagtttaaaaacagcaataataaacaaactcatgggcaa
agttttaaagctgctttgttgtcgggaccaccgggcgttggtaaaacaacaactgtgcag
gttgtttgtaaagaattggggtacgatcttgtagaattcaatgcttctgacacgagaaac
aagacgctcctgaaagaagaagtctcaggattattatccaatactacaatgaaagattac
atcactgggggtactaaacgaaagatcacaagcaagcatgtactattgatggatgaagtc
gatggcatggctggtaacgaggatcgtggtggtttacaagaactacttaatttaataaaa
aatactcaagtgccaattatttgtatctgcaatgaccgattcaacacaagagtgaaaacc
atttccgtacatagttacgatctgagatttcacaagctcagagtggagcagatcaggagc
tccatgaagtctctatgctttaaagagaaaattaacatatcgacagaggatctcgatcgt
ctaatcgagtcgacgaattacgatattcgacaagtgataaaccatctcgagttcctcggt
ggtcgtacacctcacgtagaggcgaccgacaggaaacattcgaataagaatttcaaactc
ggaccatttgacgtcgtgaaaatggcatttaaagcggaagagcagaaaaatatgagtttg
aacgataagattggtttatatttccacgattacaacatagcgcctcttttcgtagaagaa
aattacctgagtgtcagattatcccaaataccacttcttcagaggctggacaagatcgct
caagcggccgacagtatatcccaaggagatctcatcgagaaggcgatgagaagcaatatg
atgtggagcctgcttccattgcacgcatgtttctcattcgttattccaactagcgaaatg
tcggggagtcttgattcgttggtacgttttccgggctggtttgggcgaaattccaagacg
acgagatttaatagattaatgcaagaattaacgatgcatacgcgattagccacgggcgcg
aacaaagatgctctgaatatggattacttggttcatattcggaacgcaattataaaacct
ctaatagataatggtgtggacggtattgaaacagcaataaatattatgggaaaatattat
ctaacaagagaggacttggattcaataatagagatttctttctggccggaaattcgcgat
cctacgagtaatcttgatagcaaagtgaaagcagcgtttacacgagcgtatcaaaagaat
cctcctatgttgccatatgtaattaacagtaatattacaacaaagaaaagatccatgcag
gatgaaaatctcatagaagaggaaaatgatgaagaagatgacagtattgaatccgacaaa
atgatcaaggcaaagaaacctgctggtagtaccagtaaagccgctgcatcgacgaaaaga
agtggcgaaccggttaaaaaacgtgtaaagggacgcgataaacctaaataa
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