Formica exsecta (narrow-headed ant): 115241651
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Entry
115241651 CDS
T07422
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03013
Nucleocytoplasmic transport
fex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115241651
03015 mRNA surveillance pathway
115241651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115241651
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115241651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
115241651
NCBI-ProteinID:
XP_029673358
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYESDSDAESQEG
GEQRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTDNNAETQTSAK
ETKEKKVWKDKEDRWDHDRYNDEEQAPKRPEELIATYGYDIRNEEGPPRARRRRRYGRGP
NKYTRNWEDEDAYGKTTTPGRGNNRRFQKNSEDFPALGNSKNTSSKVEEPVISSAWYSSK
NKTQNKTQNFPPLQSQQDNTKTKPTTVSNTFINENKASDESTNTSWKKDGKHIVQNQNTN
GSAGSGGDAEKSANIKTSPRESNKRNPPESVSLAASRTRGRGFKSNANNNMVTNRIVENK
SKGRGPGSVTIENRRNNTAQHNDEHQLVHDMKQVNINDDSQYHQPVRHNKGFFASSNQHR
SNTVPPRMQQQQQSHQQQTHAQQQTIQQQDSSGSRPKRYSSLRQRPTISETSTQQNYPSQ
HAQHGYFPPQAGNSRAVLESQGYPQGHFEQPSPATAPITGQPVISLPPGGQPASYAPPAF
LVPPPQFIPPQTAPPSIINYVPGPNGPTFSPNFQGYQGYNPSVQPQGPPPPQELFQPQGC
TYYSPAQQQQQQQQAALMRRPKAAIPILPPPDNQQSGRGRGRSTQQYQNNQSGSNTQQIE
QHEIKSGNAVESDEKPMPGQFDSAQVEQSYTPDQESQENQISDMVRTVNDADEKVEINTN
VDTRIIVDALVQKDNLEDNISVKELLETTSNEKNTIADSPTTLAVVETERELGNIESAIP
ESTIVEKAAA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacacggcgacgtcgaaaatccaatcaatcgtgcggctctgacgatctctcg
gactcttgcgaggagctgaacgcgacaaaggagacccagagtagtgaacagactgatgga
catcaagattcagaatgtgacatttatgaaagtgattcggatgccgaatcgcaggaaggt
ggtgaacaacgtgaaagcggagatggtcaagaggaagagaaaccgcaaaagaaattagac
gacgacgaggacagacgtaatccgcagtatattccgaaacgaggaacattttacgagcac
gatgatcgtacaactgatgaagtaactgataataacgcagaaacacaaacaagtgcaaaa
gaaactaaggagaagaaggtatggaaggataaggaagataggtgggaccacgatcgatat
aatgatgaagaacaagctccaaaaagacccgaagaattgatagcaacttatggttatgat
attagaaatgaagaaggaccacctagagctagaaggagaagaagatatggtcgtgggcct
aacaaatatacaaggaattgggaagatgaagatgcttatgggaaaactactactcctggt
agaggaaacaacagacgcttccaaaaaaatagtgaagattttcctgctcttggtaatagt
aagaacacttcaagtaaagtagaggagcctgtaatttcatcagcttggtacagtagcaag
aacaaaacacaaaataaaacacaaaattttccgccacttcaatctcagcaggataacaca
aagactaagcctactactgtctctaatacattcataaatgaaaataaggcttcagacgaa
tctaccaatacatcttggaaaaaggatggcaagcatattgttcaaaatcaaaatacaaat
ggaagcgcaggatctggtggtgatgcagaaaaatcagctaatatcaaaacatcaccaagg
gagagtaacaagaggaatcccccagagtctgtaagcttggccgcgagtaggacgcgtgga
aggggtttcaagtccaatgctaataacaacatggtcactaacagaatagttgagaataaa
tcgaagggacgtggccctggttcagttacaatcgagaatagacggaacaatactgcgcag
cataatgacgagcaccagcttgttcatgatatgaaacaagtcaatattaatgatgatagt
caatatcatcagcctgtacgacataataaaggcttttttgcatcctccaatcaacataga
tcaaacacagtaccacctagaatgcaacaacagcaacagtcacatcagcaacaaacgcat
gcgcaacaacaaacaatacagcaacaagatagttctggaagcagacctaaacgatactcc
agtcttcgtcaacgacctactatttcagaaacttccacgcaacaaaattatccatctcaa
cacgctcaacatgggtattttccacctcaagctggaaattcaagagctgttttagaatct
caaggttatccacaaggtcatttcgaacagccttctccagccacagcacccataacagga
caacctgttatttctttaccacccggtggacaacctgctagttacgcgccgccggcattt
ttagtaccaccaccacaattcatacctcctcaaacggcgcctcctagtataattaattat
gttcctggtccgaatggaccaacattttcaccaaactttcaaggttatcagggatataat
ccttcggtacagcctcaagggccaccgccaccacaagaattgttccaaccacaagggtgt
acttattacagtccagcgcaacaacagcagcagcaacaacaagcagctcttatgcggcga
ccgaaagcggcgatacccattcttccaccgcctgataatcagcaaagcggaagaggaaga
ggtagaagcactcagcagtatcagaataatcaatcgggtagtaatacacaacagattgaa
caacatgaaatcaagagtggtaacgcggtggaaagtgacgaaaaaccaatgccgggacaa
ttcgacagtgcacaagtcgagcagtcatacactccggatcaagagtctcaagagaatcaa
atttcggacatggtcagaacagtgaatgacgcggatgagaaagtagaaataaataccaac
gtcgatactcgtatcattgttgacgcgcttgttcaaaaggataacttggaggataacatc
agtgtcaaagaactgttggaaacaacttctaatgaaaaaaatacgattgcagacagtcca
acgacgttggctgtcgttgagactgaacgcgaattaggtaatattgaatccgcgattccc
gagagtactattgtggaaaaagctgcagcttaa
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