Formica exsecta (narrow-headed ant): 115241763
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Entry
115241763 CDS
T07422
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
fex
Formica exsecta (narrow-headed ant)
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fex03009
]
115241763
Enzymes [BR:
fex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115241763
Ribosome biogenesis [BR:
fex03009
]
Eukaryotic type
Pre-60S particles
Helicases
115241763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115241763
NCBI-ProteinID:
XP_029673553
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MKVSKKSGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDVVAMARTGSGKTA
CFLIPLFEKLKARQTKTGARALILSPTRELALQTLKFIKELGRFTGLKAVVILGGDSMDN
QFSIIHENPDIIVATPGRFLHICIEMDLKLKNVEYIVFDEADRLFEMGFGEQIHEIVNRL
PESRQTLLFSATLPKILVDFAKAGLSDPVLLRLDVESKLPEGLTLSFITCRSEEKLAVLL
CLLKRIIKPDSQTIIFAETMHHVEYIHQILDKANISNTFIYSNLDPSARKINAAKFQTGK
VKVLIVTDVAARGIDIPYLDCVINFNFPAKSKLFVHRVGRCARAGRVGTAYNIVSSDEYP
YLLDLHLFLGRPLTIMPATGSIENMESAVGKMPQSMIEEELGELINWHNSSTDLTNMQKV
CNNAYQRYIRSRPGASIESVKRVKELCINEAGILPQYSDVSPTATDIISRMKNYRPQGTI
FEIGIKANSVDYQVMKTKRLFHKENIFNFHKKMEDRKTEEINMTSKNLPQKINLPSSSME
EINAAFSTVVVPKKRNSDDLYKISKKKKTHTKRDEEYYIPYFAPDKHTEEGLAVNTFATE
ADKAQMDLMADNEEGQHLQKQXKKKKKMVTVDRDPKAKKIRTESGVWIPATYKTNRYNMW
KEKSKVDENDSESDNEEESLQQNLRTTANTHWARHNQKLKDKVKAKNELKRPEQILKARK
LLERKHRRNGRKSGKGKGQKNHKRKH
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttccaagaaatctggaggatttcaatccatggccctcagttttccaatatta
aaaggaatcctcaaacggggctataaaattcccacacctatacaaagaaaaactataccg
ttagctctcgagggaagagatgtagtagcaatggctagaacgggtagcgggaaaactgct
tgctttttaattcctttgttcgaaaaactcaaggcgaggcaaacaaagactggagcacgc
gcgttaatattatcgcccacgcgagagctggcattgcagacattgaaatttataaaggag
ttgggaagatttacaggattaaaggcagttgtgatactgggtggtgatagtatggataat
cagttcagtataattcacgagaatcctgatatcattgtagctacaccagggagattttta
catatatgtatagaaatggacctgaaattaaaaaatgtcgaatatattgtctttgacgaa
gctgatagactgtttgaaatgggatttggggaacagatacatgagatcgtaaacagatta
cctgaatcgcgtcaaacgttgttgttctctgctactttgcccaaaatcttagtagacttt
gcaaaagctggtctaagtgatccggttctacttcgtttggatgttgagagtaaattgcct
gaagggctaacgttatcgtttattacatgtcgctctgaagagaaattggccgtacttctg
tgcttgttaaaaaggattattaagcctgattcacaaacaattatattcgcggaaactatg
catcatgtggaatatattcaccagatattggataaagcaaacatctctaatacttttatt
tactcgaatctggatccttccgcgcgtaaaataaacgcggctaaatttcaaactggcaaa
gtaaaagttcttatagtaacagacgttgctgctagaggaatagatataccatatctagat
tgtgtgattaactttaattttcctgcaaaatctaaactctttgtacatagagtaggacga
tgcgctcgagctggacgtgttggaacagcatataatattgtaagctcggacgagtatcct
tatctcctagatttacacctctttcttggtcggcctttaacaataatgccggctacagga
tccatcgaaaatatggaatctgctgtgggaaaaatgccacaatctatgatagaggaggaa
ttaggcgaattaataaattggcacaatagctctacagatcttacaaatatgcaaaaggtg
tgtaacaatgcttatcaacgatatatcagatcgcgaccaggtgcttcaatagaaagtgtt
aaaagagtcaaagaactttgtataaatgaagctggaattctaccacagtattctgatgtt
tcccctacagcaacagatataatatccaggatgaaaaactatagaccacaaggaacgata
tttgagattggtataaaagcgaattcagttgattaccaagtgatgaagacgaaacgatta
tttcacaaagagaacatctttaattttcacaaaaaaatggaagatcgcaaaactgaagaa
attaacatgacatcaaaaaacttgcctcaaaaaattaatctgccatccagcagtatggaa
gaaattaatgctgcatttagtacagtagtagttccaaaaaaaaggaatagtgacgatttg
tataaaatttcgaagaaaaagaaaacgcacacaaaacgagatgaagaatattatatacct
tatttcgcaccagacaaacatacagaggaaggtttagccgttaacacatttgccacagaa
gctgataaggcacagatggatttaatggcagacaacgaagagggccaacatcttcaaaag
caanttaagaagaaaaagaaaatggtcactgttgatagggatccgaaagcgaaaaaaata
cgtacagaatctggtgtatggatacctgctacatataaaacgaatcggtataacatgtgg
aaggagaagagtaaagttgatgaaaatgacagcgagagtgataatgaggaagaatcttta
cagcaaaacttgcgaacgacagcaaatacacattgggcgcggcataatcagaaactaaag
gacaaagttaaagcgaagaacgagctgaagaggcccgaacagatcttaaaagcgcgcaag
ctgctcgaaagaaagcatcgaagaaatggtagaaaaagtggtaaaggtaaaggtcaaaaa
aatcacaaaaggaagcattga
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